DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and AT3G27910

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_189429.1 Gene:AT3G27910 / 822414 AraportID:AT3G27910 Length:294 Species:Arabidopsis thaliana


Alignment Length:277 Identity:68/277 - (24%)
Similarity:102/277 - (36%) Gaps:66/277 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 WKHMTGRR---------LQFGAAVMEDKLILVGG-RDGLKTLN--TVESLDLNTMAWAPLNAMAT 404
            |.|....|         ||.|     .|:.:.|| .:|..|.|  .::.|. .|..:.|  :|..
plant    26 WFHCLHARLCLVGDLLLLQLG-----HKIYVFGGCINGDMTSNVFVIDCLH-GTFQFLP--SMRV 82

  Fly   405 PRHGLGVAVLEGPLYAVGGH------DGWSYLNTVERWDPIARTWSYVAPMSS---MRSTAGVAV 460
            ||......:::|.:|.:||:      |.|     ||.:|...:||...:.:.:   .:.|....|
plant    83 PRGCAAFGIVDGKIYVIGGYNKADSLDNW-----VEVFDLEKQTWESFSGLCNEELSKITLKSVV 142

  Fly   461 LGGRLYAVGGRDGSVCHRSIECYDPHTNKWS---LLAPMNRRRGGVGVTVANGFLYALGGHDCPA 522
            :..::|.:...:|.|       :||....|.   ||    .|...||..|.:..||..|...   
plant   143 MNKKIYIMDRGNGIV-------FDPKKGVWERDFLL----DRDWVVGSCVIDNMLYTFGFDS--- 193

  Fly   523 SNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGGYDGNHALKSVEEYDPVR 587
                |.|...|..|||:...|:.:..:.......|  .||.|:       .||..|.|...:..:
plant   194 ----VKRIYRVRVYDPSVRVWSFVKGIEDIPKMDG--TLGSRM-------ANHGGKLVILLNLDK 245

  Fly   588 NGWNEL--APMAFARAG 602
            ||..||  ..:|..|.|
plant   246 NGGTELWCIKIALERRG 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 63/262 (24%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 6/25 (24%)
KELCH repeat 359..402 CDD:276965 13/54 (24%)
Kelch 370..416 CDD:128874 12/48 (25%)
KELCH repeat 406..449 CDD:276965 12/48 (25%)
Kelch 418..463 CDD:128874 12/53 (23%)
KELCH repeat 453..497 CDD:276965 10/46 (22%)
Kelch 464..510 CDD:128874 12/48 (25%)
Kelch_1 499..546 CDD:279660 14/46 (30%)
KELCH repeat 500..549 CDD:276965 13/48 (27%)
KELCH repeat 553..596 CDD:276965 12/44 (27%)
Kelch 564..610 CDD:128874 12/41 (29%)
AT3G27910NP_189429.1 Kelch 48..94 CDD:128874 12/48 (25%)
Kelch_1 83..123 CDD:279660 12/44 (27%)
KELCH repeat 84..130 CDD:276965 12/50 (24%)
KELCH repeat 173..213 CDD:276965 14/46 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.