DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT3G08810

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_187493.1 Gene:AT3G08810 / 820028 AraportID:AT3G08810 Length:343 Species:Arabidopsis thaliana


Alignment Length:204 Identity:46/204 - (22%)
Similarity:73/204 - (35%) Gaps:45/204 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 NTVERWDPIAR----TWSYVAPMSSMRSTAGVAVLGG-------RLYAVGGRDGSVC-------- 476
            :|..||..::|    |.:|....||..:.|.|.:.||       .|.|||....::|        
plant    83 STGYRWFSLSRKPDQTLTYEERKSSGYALARVPIPGGSPNVRSSSLVAVGSDIYNICGSINKASS 147

  Fly   477 HRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATD 541
            ..|:...|..::.|.....:......:..:|.:|   ..|||....|..   .:..|..|:....
plant   148 SSSVSILDCQSHTWREAPSLPVELSSISASVRDG---NQGGHGYSDSRK---NSFKVFAYNSKEG 206

  Fly   542 TWTLICSLALGRDAIGCALLGDRLIVVGGYDGNHALKSVEE-----YDPVRNGWNELAPM----A 597
            .|..:..|     ..|..:|.|...|:     ::...||.:     ||.....|.:|..:    .
plant   207 RWDHLVGL-----GAGSFMLPDSYCVI-----DNVSYSVSDGMFRWYDTEVRRWKDLRGLFQLPK 261

  Fly   598 FARAGACVV 606
            |: |||||:
plant   262 FS-AGACVI 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 38/183 (21%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874
KELCH repeat 359..402 CDD:276965
Kelch 370..416 CDD:128874
KELCH repeat 406..449 CDD:276965 6/21 (29%)
Kelch 418..463 CDD:128874 10/35 (29%)
KELCH repeat 453..497 CDD:276965 12/58 (21%)
Kelch 464..510 CDD:128874 9/53 (17%)
Kelch_1 499..546 CDD:279660 9/46 (20%)
KELCH repeat 500..549 CDD:276965 9/48 (19%)
KELCH repeat 553..596 CDD:276965 10/47 (21%)
Kelch 564..610 CDD:128874 13/52 (25%)
AT3G08810NP_187493.1 F-box 25..68 CDD:279040
Kelch_6 126..169 CDD:290672 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D709680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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