DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT2G44700

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_181998.1 Gene:AT2G44700 / 819078 AraportID:AT2G44700 Length:368 Species:Arabidopsis thaliana


Alignment Length:380 Identity:71/380 - (18%)
Similarity:119/380 - (31%) Gaps:140/380 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 SAAREQHIPELLALVRLPLLQPAFIMDHVEN-----VCNANECQQLVMEAFKWHLMPERRSRIAT 311
            |:|.....|.|  .:.|||...:.|:..|..     :|:.::               ..||.:.:
plant    17 SSASASASPSL--FLSLPLEIISMILARVPKRYYPILCSVSK---------------NMRSLVRS 64

  Fly   312 ERTTPRKSTVGR-LLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDKLILVG 375
            ......:|.:|: .|.:|.:|        |:|.|..|.|     .|.||:               
plant    65 PEIHKARSLLGKDYLYIGFID--------ENYRPVYDYW-----YTLRRI--------------- 101

  Fly   376 GRDGLKTLNTVESLD---------LNTMAWAP----LNAMATPRHGLGV------AVLEGPLYAV 421
              :...|.|..||::         .:..|..|    ::...||...|.:      .:.:||...|
plant   102 --ENSTTENLFESIEFPYPSEPNRFSMNAVGPKIFFISESCTPSSRLSIFDTRFGELRQGPCLLV 164

  Fly   422 GGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGG-RDGSVCHRSIECYDP 485
                                          .|....|.::||::|.:|| :|..:   :.|.:|.
plant   165 ------------------------------KRGYNCVGLVGGKVYVIGGYQDDEI---AAESFDL 196

  Fly   486 HTNKWSLLAPMNRRRGGVGVTVAN-GF---LYALGGHDCPASNPMVC---RTETVERYDPATDTW 543
            :|..|......:.:.....:..|| .|   :.||...:     .|.|   |..:.:|.:...|.|
plant   197 NTQTWEAAPIPDEKESHRWICKANVSFDRKVCALRSRE-----GMTCYDTRDGSCQRSEMPNDQW 256

  Fly   544 TLI--C--------------------SLALGRDAIGCALLGDRLIVVGGYDGNHA 576
            :.:  |                    .|.|.|...|..|...|.:.:|.|.|..|
plant   257 SRVGLCVIDNVLFVYFSRFGLMWYDSKLMLWRVVYGFDLDNARSVGIGEYYGKLA 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 71/380 (19%)
BACK 179..281 CDD:285009 8/28 (29%)
Kelch 323..369 CDD:128874 11/46 (24%)
KELCH repeat 359..402 CDD:276965 7/55 (13%)
Kelch 370..416 CDD:128874 9/64 (14%)
KELCH repeat 406..449 CDD:276965 4/48 (8%)
Kelch 418..463 CDD:128874 3/44 (7%)
KELCH repeat 453..497 CDD:276965 12/44 (27%)
Kelch 464..510 CDD:128874 10/47 (21%)
Kelch_1 499..546 CDD:279660 11/53 (21%)
KELCH repeat 500..549 CDD:276965 12/77 (16%)
KELCH repeat 553..596 CDD:276965 8/24 (33%)
Kelch 564..610 CDD:128874 5/13 (38%)
AT2G44700NP_181998.1 F-box 28..73 CDD:279040 8/59 (14%)
KELCH repeat 123..162 CDD:276965 7/38 (18%)
KELCH repeat 166..207 CDD:276965 12/43 (28%)
Kelch_1 166..205 CDD:279660 12/41 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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