DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT2G29860

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_180547.1 Gene:AT2G29860 / 817536 AraportID:AT2G29860 Length:240 Species:Arabidopsis thaliana


Alignment Length:116 Identity:33/116 - (28%)
Similarity:51/116 - (43%) Gaps:11/116 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 LNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGG 463
            ||::.....|..|..:...:|.:||:: :..::||...|....||.|:..|...|..|...|:.|
plant   102 LNSLPHMFPGAAVVTIGYKIYVMGGYN-YQPVSTVIIIDCRFHTWHYLQDMQRARYHATPGVIDG 165

  Fly   464 RLYAVGGR---DGSVCHRSIECYDPHTNKWSLL---APMNRRRGGVGVTVA 508
            |:|.:|||   |..    .:|.:|..|..|..:   .|......|:.||.|
plant   166 RIYVIGGRKKQDAD----WVEVFDVTTESWETVPTQCPNEASENGLFVTYA 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 33/116 (28%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874
KELCH repeat 359..402 CDD:276965 2/2 (100%)
Kelch 370..416 CDD:128874 4/16 (25%)
KELCH repeat 406..449 CDD:276965 11/42 (26%)
Kelch 418..463 CDD:128874 13/44 (30%)
KELCH repeat 453..497 CDD:276965 15/49 (31%)
Kelch 464..510 CDD:128874 15/51 (29%)
Kelch_1 499..546 CDD:279660 4/10 (40%)
KELCH repeat 500..549 CDD:276965 4/9 (44%)
KELCH repeat 553..596 CDD:276965
Kelch 564..610 CDD:128874
AT2G29860NP_180547.1 F-box 22..64 CDD:279040
Kelch_1 108..152 CDD:279660 11/44 (25%)
KELCH repeat 111..151 CDD:276965 11/40 (28%)
Kelch_1 154..196 CDD:279660 14/45 (31%)
KELCH repeat 155..195 CDD:276965 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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