DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and ivns1abpa

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_954973.2 Gene:ivns1abpa / 387591 ZFINID:ZDB-GENE-031222-2 Length:643 Species:Danio rerio


Alignment Length:632 Identity:171/632 - (27%)
Similarity:286/632 - (45%) Gaps:100/632 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QDEFFRCRDHADNILKRMQLYVDSQQLCDVVLIAGIDGKRVPAHRLVLSASSAYFSAMFTGSLRE 112
            :||.|     .|:.:.:|.....:.|.|||.|  .:.|..:.|||.||:..|.|...:|...|..
Zfish    10 EDESF-----LDSTVAKMNALRKNGQFCDVRL--QVCGHELMAHRAVLACCSPYLFEIFNSDLEP 67

  Fly   113 TKEQEVTLGEVHGDALHLLVQYCYTGFIEMREDTVETLLATACLLQLNAVVTACCNFLARQLHPS 177
            .....|...::..:|:.:|:.|.||..::..::.|:.:.:.|..|:::.|...|.::|..::...
Zfish    68 HGISHVKFEDLDPEAVEILLNYAYTAQLKADKELVKEVYSAAKRLKMDRVKQICGDYLLSKMDSQ 132

  Fly   178 NCLGFAFFAEQQSCTTLLRLAQAYTCQYFMQVCQNQEFFQLNADQLGKLLSSDDLNVPSEQDVFH 242
            :.:.:..||.......||....:|..::.::|.:.::|.:|...:| :::..|:|.:||...::.
Zfish   133 SAISYRNFASCMGDGRLLGKIDSYIQEHLLEVSEQEDFLKLPRLKL-EVMLEDNLTLPSNGKLYS 196

  Fly   243 SLMSWVRHDSAAREQHIPELLALVRL-------PLLQPAFI----------MDHV---------E 281
            .::.||:.......:.:..|:..|:.       .||..:.:          .||:         |
Zfish   197 KVIGWVQRSLWENGEPLERLMEEVQTLYYSADHKLLDGSLLDGQAEVFGTEDDHIQFVQKKPPRE 261

  Fly   282 NV---------------CNANECQQLVMEAFKWHLMPERRSRIATERTTPRK----STVGRLLAV 327
            ||               ...:.|:|      :|       ..||:|:||...    :.:..:|.|
Zfish   262 NVHRQLSTSSSGSLSPGSTKHPCKQ------EW-------KYIASEKTTNNTYLCLAVLNGMLCV 313

  Fly   328 GGMDAHKGAISIESYCPRLDKWTPWKHMTGRRLQ----------------FGAAVMEDKLILVGG 376
            ..:.......:..|..|.|.|...::   |:.|:                .|.|.:.|:||..||
Zfish   314 IFLHGRSSPQASPSATPCLTKSLSFE---GQPLEEEPDKLLSPMHYARSGLGIASLNDQLIAAGG 375

  Fly   377 RDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWS-YLNTVERWDPIA 440
            .:..:.|.|||..::.|.:|..:..|.|||....:|||.|.||.:||.:|.| .|:..|.::|.|
Zfish   376 YNREECLRTVECYNIKTNSWTFIAPMRTPRARFQMAVLMGQLYVMGGSNGHSDELSCGETYNPNA 440

  Fly   441 RTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRD--GSVCHRSIECYDPHTNKWSLLAPMNRRRGGV 503
            ..|:.|..:.:.|..|||..|..:||.|||.|  |....::.:.:||.:..|:..||:|.||...
Zfish   441 DEWTQVPELRTNRCNAGVCSLNNKLYVVGGSDPCGQKGLKNCDVFDPISKAWTNCAPLNIRRHQA 505

  Fly   504 GVTVANGFLYALGGHD---CPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRL 565
            .|...:||:|.:||.:   |         ..:||||:|..:|||||.|:.:.|...|.|:...:|
Zfish   506 AVCELDGFMYVIGGAESWNC---------LNSVERYNPENNTWTLIASMNIARRGAGVAVYEGKL 561

  Fly   566 IVVGGYDGNHALKSVEEYDPVRNGWNELAPMAFARAGACVVAIPNVI 612
            .||||:||:|||:.||.||||||.|..|..|...|:.|....:.:||
Zfish   562 FVVGGFDGSHALRCVEMYDPVRNEWRMLGSMNSPRSNAGAAVLNDVI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 159/586 (27%)
KELCH repeat 359..402 CDD:276965 14/58 (24%)
KELCH repeat 406..449 CDD:276965 17/43 (40%)
KELCH repeat 453..497 CDD:276965 17/45 (38%)
KELCH repeat 500..549 CDD:276965 18/51 (35%)
KELCH repeat 553..596 CDD:276965 23/42 (55%)
ivns1abpaNP_954973.2 BTB_POZ_NS1BP 14..137 CDD:349615 30/129 (23%)
BACK_NS1BP_IVNS1ABP 129..225 CDD:350577 17/96 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..282 3/24 (13%)
NanM 351..613 CDD:442289 99/267 (37%)
KELCH repeat 358..401 CDD:276965 13/42 (31%)
Kelch 1 369..415 17/45 (38%)
KELCH repeat 405..450 CDD:276965 17/44 (39%)
Kelch 2 416..463 17/46 (37%)
KELCH repeat 453..498 CDD:276965 16/44 (36%)
Kelch 3 465..512 16/46 (35%)
KELCH repeat 502..545 CDD:276965 18/51 (35%)
Kelch 4 513..559 19/54 (35%)
KELCH repeat 549..593 CDD:276965 23/43 (53%)
Kelch 5 560..606 23/45 (51%)
Kelch_1 595..638 CDD:396078 4/14 (29%)
KELCH repeat 596..638 CDD:276965 4/13 (31%)
Kelch 6 608..643 1/1 (100%)

Return to query results.
Submit another query.