DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and Ivns1abp

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_006250050.1 Gene:Ivns1abp / 289089 RGDID:1306290 Length:642 Species:Rattus norvegicus


Alignment Length:654 Identity:179/654 - (27%)
Similarity:292/654 - (44%) Gaps:109/654 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SGHISMLADNTLESLSRDYSLGSLNSAGSQDEFFRCRDHADNILKRMQLYVDSQQLCDVVLIAGI 83
            :|::....:|.:||     |:..||:                 |::      |.|.|||.|  .:
  Rat     4 NGYLMFEDENFIES-----SVAKLNA-----------------LRK------SGQFCDVRL--QV 38

  Fly    84 DGKRVPAHRLVLSASSAYFSAMFTGSLRETKEQEVTLGEVHGDALHLLVQYCYTGFIEMREDTVE 148
            .|..:.|||.||:..|.|...:|...........|.|.:::.:|:.:|:.|.||..::..::.|:
  Rat    39 CGHEMLAHRAVLACCSPYLFEIFNSDSDPHGVSHVKLDDLNPEAVEVLLNYAYTAQLKADKELVK 103

  Fly   149 TLLATACLLQLNAVVTACCNFLARQLHPSNCLGFAFFAEQQSCTTLLRLAQAYTCQYFMQVCQNQ 213
            .:.:.|..|:::.|...|.::|..::..::|:.:..||.....:.||....||..::.:|:.:.:
  Rat   104 DVYSAAKKLKMDRVKQVCGDYLLSRMDVTSCISYRNFASCMGDSRLLNKVDAYIQEHLLQISEEE 168

  Fly   214 EFFQLNADQLGKLLSSDDLNVPSEQDVFHSLMSWVRHDSAAREQHIPELLALVRL---------- 268
            ||.:|...:| :::..|::.:||...::..:::||:.........:.||:..|:.          
  Rat   169 EFLKLPRLKL-EVMLEDNVCLPSNGKLYTKVINWVQRSIWENGDSLEELMEEVQTLYYSADHKLL 232

  Fly   269 ---PLLQPAFIM----DHVENV-------------------CNANECQQLVMEAFKWHLMPERRS 307
               ||...|.:.    ||::.|                   |.::....:.....:|.:      
  Rat   233 DGNPLDGQAEVFGSDDDHIQFVQKKPPRENGHKQISGSSTGCLSSPNASVQSPKHEWKI------ 291

  Fly   308 RIATERTTPRKSTVGRLLAVGG------MDAHKGAISIESYCPRLDK------------WTPWKH 354
             :|:|:|:  .:|...|..:.|      :.......|..:..|:|.|            ..|...
  Rat   292 -VASEKTS--NNTYLCLAVLDGTFCVIFLHGRNSPQSSPTSTPKLSKSLSFEMQPDELLEKPMSP 353

  Fly   355 MTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLY 419
            |...|...|.|.|..|||..||.:..:.|.|||..|.:|..|:.|..|.|||....:|||.|.||
  Rat   354 MQYARSGLGTAEMNGKLIAAGGYNREECLRTVECYDPHTDHWSFLAPMRTPRARFQMAVLMGQLY 418

  Fly   420 AVGGHDGWS-YLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRD--GSVCHRSIE 481
            .|||.:|.| .|:..|.:||....|:.|..:.:.|..|||..|.|:||.|||.|  |....::.:
  Rat   419 VVGGSNGHSDDLSCGEMYDPSIDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCD 483

  Fly   482 CYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHD---CPASNPMVCRTETVERYDPATDTW 543
            .:||.|..|:..||:|.||....|....|:||.:||.:   |         ..|||||:|..:||
  Rat   484 VFDPVTKSWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNC---------LNTVERYNPENNTW 539

  Fly   544 TLICSLALGRDAIGCALLGDRLIVVGGYDGNHALKSVEEYDPVRNGWNELAPMAFARAGACVVAI 608
            |||..:.:.|...|.|:|..:|.|.||:||:||:..||.|||.||.|..:..|...|:.|.:..:
  Rat   540 TLIAPMNVARRGAGVAVLDGKLFVGGGFDGSHAISCVEMYDPTRNEWKMMGNMTSPRSNAGITTV 604

  Fly   609 PNVI 612
            .|.|
  Rat   605 GNTI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045 27/99 (27%)
PHA03098 71..591 CDD:222983 165/579 (28%)
BACK 179..281 CDD:285009 25/118 (21%)
Kelch 323..369 CDD:128874 12/63 (19%)
KELCH repeat 359..402 CDD:276965 17/42 (40%)
Kelch 370..416 CDD:128874 20/45 (44%)
KELCH repeat 406..449 CDD:276965 18/43 (42%)
Kelch 418..463 CDD:128874 18/45 (40%)
KELCH repeat 453..497 CDD:276965 19/45 (42%)
Kelch 464..510 CDD:128874 17/47 (36%)
Kelch_1 499..546 CDD:279660 18/49 (37%)
KELCH repeat 500..549 CDD:276965 19/51 (37%)
KELCH repeat 553..596 CDD:276965 20/42 (48%)
Kelch 564..610 CDD:128874 19/45 (42%)
Ivns1abpXP_006250050.1 BTB_POZ_NS1BP 14..137 CDD:349615 35/152 (23%)
PHA03098 23..638 CDD:222983 173/630 (27%)
BACK_NS1BP_IVNS1ABP 129..225 CDD:350577 20/96 (21%)
KELCH repeat 358..401 CDD:276965 17/42 (40%)
KELCH repeat 405..450 CDD:276965 18/44 (41%)
KELCH repeat 453..498 CDD:276965 18/44 (41%)
KELCH repeat 502..546 CDD:276965 19/52 (37%)
KELCH repeat 549..592 CDD:276965 20/42 (48%)
KELCH repeat 596..635 CDD:276965 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.