DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and Klhl4

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_766369.2 Gene:Klhl4 / 237010 MGIID:2442829 Length:717 Species:Mus musculus


Alignment Length:615 Identity:323/615 - (52%)
Similarity:419/615 - (68%) Gaps:35/615 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ESPSRDSTASTSGHISMLADNTLESLSRDYSLGSLNSAG-----------SQDEFFRCRDHADNI 61
            |..|||        :.|:.|:.:|.:          .||           |.::.:|.|.|||..
Mouse   121 EKRSRD--------LEMMGDDNIEDM----------RAGPCVEEPEQMTTSSNDHYRSRSHADYT 167

  Fly    62 LKRMQLYVDSQQLCDVVLIAGIDGKRVPAHRLVLSASSAYFSAMFTGSLRETKEQEVTLGEVHGD 126
            |.:|:.|:..::||||:||||  ..::|||||||||.|.||:||||..:.|.:::||.:..|..:
Mouse   168 LCKMESYLKERKLCDVLLIAG--PLKIPAHRLVLSAVSDYFAAMFTNDVLEARQEEVKIEGVDPN 230

  Fly   127 ALHLLVQYCYTGFIEMREDTVETLLATACLLQLNAVVTACCNFLARQLHPSNCLGFAFFAEQQSC 191
            ||:.||||.|||.:::||||:|.||:.||||||..|:..|||||.:|||||||||...|.:.|.|
Mouse   231 ALNSLVQYAYTGVLQLREDTIENLLSAACLLQLTQVIDVCCNFLIKQLHPSNCLGIRSFGDAQGC 295

  Fly   192 TTLLRLAQAYTCQYFMQVCQNQEFFQLNADQLGKLLSSDDLNVPSEQDVFHSLMSWVRHDSAARE 256
            ..|..:|..|..::|:.|.:||||..|.|:::.|||.|||:|||.|:.:||:||.||.||:.||:
Mouse   296 MELQNVAHKYAMEHFIDVIKNQEFLLLPANEISKLLCSDDINVPDEETIFHALMQWVGHDAQARQ 360

  Fly   257 QHIPELLALVRLPLLQPAFIMDHVEN--VCNAN-ECQQLVMEAFKWHLMPERRSRIATERTTPRK 318
            :.:.:||:.:|||||.|..:.| :||  ..:.| |||:|:|||.|:||:|||||.:.:.||.|||
Mouse   361 RDLAKLLSYIRLPLLSPQLLAD-LENSSFFSGNLECQKLLMEAMKYHLLPERRSMLQSPRTKPRK 424

  Fly   319 STVGRLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDKLILVGGRDGLKTL 383
            ||||.|.|||||||.||..:||.|..|.:.|.....|:|||||||.||:::||.:||||||||||
Mouse   425 STVGALYAVGGMDAAKGTTTIEKYDLRTNSWIHIGTMSGRRLQFGVAVVDNKLYVVGGRDGLKTL 489

  Fly   384 NTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAP 448
            ||||..:..|..|..:..|:|.|||||||.||||:||||||||||||||||||||..|.|:|||.
Mouse   490 NTVECFNPVTKTWVVMPPMSTHRHGLGVATLEGPMYAVGGHDGWSYLNTVERWDPDGRQWNYVAS 554

  Fly   449 MSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLY 513
            ||:.|||.||..|..||||:||||||.|.:|:|.:|||||||||.|||::|||||||...||:||
Mouse   555 MSTPRSTVGVVALNNRLYAIGGRDGSSCLKSMEFFDPHTNKWSLCAPMSKRRGGVGVATHNGYLY 619

  Fly   514 ALGGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGGYDGNHALK 578
            .:||||.||.|.....::.||||||..|:|:.:..|::.|||:....|||:|.|||||||:..|.
Mouse   620 VVGGHDAPAPNHCSRLSDCVERYDPKGDSWSTVAPLSVPRDAVAVCPLGDKLYVVGGYDGHTYLN 684

  Fly   579 SVEEYDPVRNGWNELAPMAFARAGACVVAI 608
            :||.||..::.|.|..|:...|||||||.:
Mouse   685 TVESYDAQKDEWKEEVPVNIGRAGACVVVV 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045 54/99 (55%)
PHA03098 71..591 CDD:222983 295/522 (57%)
BACK 179..281 CDD:285009 46/101 (46%)
Kelch 323..369 CDD:128874 25/45 (56%)
KELCH repeat 359..402 CDD:276965 25/42 (60%)
Kelch 370..416 CDD:128874 28/45 (62%)
KELCH repeat 406..449 CDD:276965 36/42 (86%)
Kelch 418..463 CDD:128874 33/44 (75%)
KELCH repeat 453..497 CDD:276965 30/43 (70%)
Kelch 464..510 CDD:128874 32/45 (71%)
Kelch_1 499..546 CDD:279660 26/46 (57%)
KELCH repeat 500..549 CDD:276965 25/48 (52%)
KELCH repeat 553..596 CDD:276965 21/42 (50%)
Kelch 564..610 CDD:128874 23/45 (51%)
Klhl4NP_766369.2 BTB 171..275 CDD:279045 57/105 (54%)
PHA03098 175..697 CDD:222983 295/524 (56%)
BACK 283..382 CDD:285009 45/98 (46%)
Kelch 430..475 CDD:128874 25/44 (57%)
Kelch_1 464..509 CDD:279660 26/44 (59%)
KELCH repeat 465..508 CDD:276965 25/42 (60%)
KELCH repeat 512..556 CDD:276965 36/43 (84%)
Kelch 525..569 CDD:128874 33/43 (77%)
KELCH repeat 559..602 CDD:276965 29/42 (69%)
Kelch 570..616 CDD:128874 32/45 (71%)
Kelch_1 605..656 CDD:279660 26/50 (52%)
KELCH repeat 606..657 CDD:276965 26/50 (52%)
KELCH repeat 659..698 CDD:276965 20/38 (53%)
Kelch 670..714 CDD:128874 23/43 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5775
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 688 1.000 Inparanoid score I696
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48972
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 1 1.000 - - otm44241
orthoMCL 1 0.900 - - OOG6_104433
Panther 1 1.100 - - O PTHR24412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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