DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and C53A5.9

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_506605.2 Gene:C53A5.9 / 183739 WormBaseID:WBGene00008267 Length:445 Species:Caenorhabditis elegans


Alignment Length:483 Identity:114/483 - (23%)
Similarity:173/483 - (35%) Gaps:101/483 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 NADQLGKLLSSDDLNVPSEQ-----DVFHSLMSW--VRHDSAAREQHIPEL------LALVRLPL 270
            ||.|  .:.:.|:|..||.:     ||....:.:  .:...:..|..:.||      .:.|.|..
 Worm    15 NASQ--SVTALDELKTPSSEVADAWDVCDQPLEYQDAQFSESEMETQMKELEDCSIEASRVFLEN 77

  Fly   271 LQPAF------------------------------IMDHVENVCNANECQQLVMEAFKWHLMPER 305
            ||.:|                              |.|.|..:..|.:..:::.|..:.|....:
 Worm    78 LQKSFKLMKLLQLTQSLNPQESSYNRKIISTEMKKINDTVSQLKYAGKRIEMINEHLEKHRFTGK 142

  Fly   306 RSRIATERTTPRKSTVGRLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDK 370
            ......|   |....|  |:|.....||| .:.|.|:.|:..|:.|...:...|..|..|..:..
 Worm   143 DGDAFLE---PNMDPV--LIADQAQSAHK-PLLIGSFDPKTQKYKPIGRLPDPRANFAVASSKTN 201

  Fly   371 LILVGGRDGLKTLNTVESLDLNTMA---WAPLNAMAT-PRHGLGVAVLEGPLYAVGGHDGWSYLN 431
            |.::||....:.||..|..:....|   .|.||...| |..|..    .|.||.|||:|. .||:
 Worm   202 LYVIGGTHNGQFLNKFEYYNQKKNARCMGANLNHKRTKPAAGFH----NGALYVVGGYDS-IYLS 261

  Fly   432 TVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPM 496
            :||.:|....||.....:::.|:.|.|....|.::.:||.:|.....|||......|::.:...|
 Worm   262 SVELYDLEEGTWKNGPSLNNCRANAAVVACYGEIFVLGGFNGKSNEESIEKISASGNEFEIFGEM 326

  Fly   497 NRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALL 561
            ...|.|.|..|..|.:|..||.....:.     .::|..|||.|.||....|:...|.|......
 Worm   327 EGGRSGFGACVFQGRIYIAGGWSNTRNT-----LKSVRSYDPYTKTWRDEPSMKNARKAFTLHAT 386

  Fly   562 GDRLIVVGGYDGNHA-LKSVEEYDPVRNGWNELAPMAFARAGACVVAIPNVIPPAAQQPPPSATK 625
            .:.:..:.|||...| |..:|.:||.:..|                   :::|.....||.|   
 Worm   387 NEAIYAIRGYDEESALLDQIERFDPKKLKW-------------------SIVPSKPHVPPTS--- 429

  Fly   626 KKKWKPVRLDPICYNRRPRCVEFVDYYN 653
                         ||......|..|.|:
 Worm   430 -------------YNYEKYYAEMSDNYS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 104/419 (25%)
BACK 179..281 CDD:285009 19/104 (18%)
Kelch 323..369 CDD:128874 13/45 (29%)
KELCH repeat 359..402 CDD:276965 13/45 (29%)
Kelch 370..416 CDD:128874 13/49 (27%)
KELCH repeat 406..449 CDD:276965 15/42 (36%)
Kelch 418..463 CDD:128874 16/44 (36%)
KELCH repeat 453..497 CDD:276965 11/43 (26%)
Kelch 464..510 CDD:128874 12/45 (27%)
Kelch_1 499..546 CDD:279660 15/46 (33%)
KELCH repeat 500..549 CDD:276965 15/48 (31%)
KELCH repeat 553..596 CDD:276965 11/43 (26%)
Kelch 564..610 CDD:128874 9/46 (20%)
C53A5.9NP_506605.2 KELCH repeat 190..234 CDD:276965 11/43 (26%)
Kelch 202..247 CDD:128874 13/48 (27%)
KELCH repeat 237..279 CDD:276965 17/46 (37%)
Kelch 249..293 CDD:128874 16/44 (36%)
KELCH repeat 283..327 CDD:276965 11/43 (26%)
Kelch 295..340 CDD:128874 12/44 (27%)
KELCH repeat 330..375 CDD:276965 16/49 (33%)
Kelch 341..388 CDD:128874 13/51 (25%)
Kelch_1 377..423 CDD:279660 12/64 (19%)
KELCH repeat 378..421 CDD:276965 11/61 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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