DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and C53A5.6

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001256597.1 Gene:C53A5.6 / 183737 WormBaseID:WBGene00008266 Length:573 Species:Caenorhabditis elegans


Alignment Length:417 Identity:93/417 - (22%)
Similarity:155/417 - (37%) Gaps:67/417 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 QVCQN------------QEFFQLNADQLGKLLSSDDLNVPSEQDVFHSLMSWVRHDSAAREQHIP 260
            |||.:            |.:|:          ..:.|:.|..:..|:::        .|..:.|.
 Worm   196 QVCDDISDKFAATIKSLQNYFE----------KHEKLSPPGRKTHFNNI--------EAEMEKIS 242

  Fly   261 ELLALVRLPLLQPAFIMDHVENVCNANECQQLVMEAFKWHLMPERRSRIATERTTP-----RKST 320
            :.:|||:....:..|:.:.:|      |..::|.:.    ..|..::........|     ||.:
 Worm   243 DTIALVKDAGTRLDFLNNEIE------EHDRIVFQT----KQPVTKANFVFASQDPVLVADRKQS 297

  Fly   321 VGRLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDKLILVGGRDGLKTLNT 385
            ....|.:|            .|.|:...|||...|...:..:..|..:.::.:|||.:....||.
 Worm   298 AREPLLIG------------VYDPKNRGWTPVGRMPNPKSNYAVACSKSQIYIVGGMNNGSWLNN 350

  Fly   386 VESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMS 450
            ||..|.........|.|...|......:....:|..||:|. :|:|:||.:|.....|.....:.
 Worm   351 VEMYDREKNLRRDCNKMKRGRTRTSAGIHNNKMYVAGGYDS-TYMNSVEVYDTDQGEWKDGPSLQ 414

  Fly   451 SMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYAL 515
            ..|:.|.|....|.:|.:||.:|......||.......|:.::..|...|.|.|.....|.:|..
 Worm   415 RPRADAAVVPCNGEVYVLGGFNGKEYEEKIEKLSEPGQKFEIVGDMQGSRAGFGSCAFRGRIYIA 479

  Fly   516 GGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGGYDGNHAL-KS 579
            ||.. .:||.:    .:|..|||.|.:|....||:..|.........:.:..:.|...|.:| ..
 Worm   480 GGWS-NSSNTL----RSVRSYDPLTKSWRDEPSLSKDRKYFTLHSTNEAIYAIRGCADNWSLINE 539

  Fly   580 VEEYDPVRNGWNELA---PMAFARAGA 603
            ||.:||.:..|..::   ||..|.:.|
 Worm   540 VERFDPEKRAWEIISCSGPMVGAGSSA 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 88/400 (22%)
BACK 179..281 CDD:285009 14/84 (17%)
Kelch 323..369 CDD:128874 9/45 (20%)
KELCH repeat 359..402 CDD:276965 10/42 (24%)
Kelch 370..416 CDD:128874 11/45 (24%)
KELCH repeat 406..449 CDD:276965 11/42 (26%)
Kelch 418..463 CDD:128874 13/44 (30%)
KELCH repeat 453..497 CDD:276965 11/43 (26%)
Kelch 464..510 CDD:128874 11/45 (24%)
Kelch_1 499..546 CDD:279660 15/46 (33%)
KELCH repeat 500..549 CDD:276965 15/48 (31%)
KELCH repeat 553..596 CDD:276965 9/46 (20%)
Kelch 564..610 CDD:128874 12/44 (27%)
C53A5.6NP_001256597.1 zf-RING_5 8..50 CDD:373177
modified RING-HC finger (C3HC3D-type) 9..45 CDD:319361
KELCH repeat 325..367 CDD:276965 10/41 (24%)
PHA03098 <336..562 CDD:222983 61/231 (26%)
KELCH repeat 371..413 CDD:276965 11/42 (26%)
KELCH repeat 417..461 CDD:276965 11/43 (26%)
KELCH repeat 464..508 CDD:276965 15/48 (31%)
KELCH repeat 512..554 CDD:276965 9/41 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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