DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and LOC108178999

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_017212974.2 Gene:LOC108178999 / 108178999 -ID:- Length:268 Species:Danio rerio


Alignment Length:260 Identity:90/260 - (34%)
Similarity:131/260 - (50%) Gaps:11/260 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 WKHMTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNT---MAWAPLNAMATPRHGLGVAV 413
            ::::..:|.......:.|::.::||.||...|::||.||...   ..|..:..|...|...|...
Zfish    12 FQNIARKRRYVATVALNDRVYVIGGYDGRSRLSSVECLDYTADEDGVWYSVATMNVRRGLAGATT 76

  Fly   414 LEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHR 478
            |...:|..||.||.....::||:||....||.:..|.:.|..||:.|..|.:|.:||.||.....
Zfish    77 LGDMIYVAGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGLIYCLGGYDGLNILN 141

  Fly   479 SIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTW 543
            |:|.|||||..|:.:.||..:|.|.||.:.|..:|.:||.|..|      ...:||.|:..||.|
Zfish   142 SVERYDPHTGHWTSVTPMANKRSGAGVALLNDHIYVVGGFDGTA------HLSSVEVYNIRTDYW 200

  Fly   544 TLICSLALGRDAIGCALLGDRLIVVGGYDGNHALKSVEEYDPVRNGWNELAPMAFAR--AGACVV 606
            |.:.::...|..:|..:|..||..:.|||||..|.|:|.||||.:.|..:..||..|  ||.||:
Zfish   201 TTVANMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPVIDSWEVVTSMATQRCDAGVCVL 265

  Fly   607  606
            Zfish   266  265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 82/241 (34%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 1/16 (6%)
KELCH repeat 359..402 CDD:276965 12/45 (27%)
Kelch 370..416 CDD:128874 14/48 (29%)
KELCH repeat 406..449 CDD:276965 14/42 (33%)
Kelch 418..463 CDD:128874 16/44 (36%)
KELCH repeat 453..497 CDD:276965 19/43 (44%)
Kelch 464..510 CDD:128874 19/45 (42%)
Kelch_1 499..546 CDD:279660 17/46 (37%)
KELCH repeat 500..549 CDD:276965 17/48 (35%)
KELCH repeat 553..596 CDD:276965 18/42 (43%)
Kelch 564..610 CDD:128874 22/45 (49%)
LOC108178999XP_017212974.2 BTB <4..205 CDD:333434 65/198 (33%)
KELCH repeat 19..65 CDD:276965 12/45 (27%)
KELCH repeat 69..112 CDD:276965 14/42 (33%)
KELCH repeat 116..159 CDD:276965 18/42 (43%)
KELCH repeat 163..207 CDD:276965 17/49 (35%)
KELCH repeat 210..255 CDD:276965 19/44 (43%)
Kelch 221..265 CDD:128874 21/43 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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