DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and klhl4

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001096427.1 Gene:klhl4 / 100125035 XenbaseID:XB-GENE-988002 Length:719 Species:Xenopus tropicalis


Alignment Length:606 Identity:332/606 - (54%)
Similarity:426/606 - (70%) Gaps:22/606 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PSRDSTASTSG-HISMLADNTLESLSRDYSLGSLNSAGSQDEFFRCRDHADNILKRMQLYVDSQQ 73
            |.....|:|.. |::..:.|            .:|::|| ||:|:..:||:...::|:.|:..:|
 Frog   130 PEEHPEAATDRLHVTCSSPN------------RMNASGS-DEYFQSLNHAEQTFRKMENYLQQKQ 181

  Fly    74 LCDVVLIAGIDGKRVPAHRLVLSASSAYFSAMFTGSLRETKEQEVTLGEVHGDALHLLVQYCYTG 138
            ||||:||||  ..::|||||||||.|.||:||||..:||.||:|:.:..|..|||..||.|.|||
 Frog   182 LCDVLLIAG--NLKIPAHRLVLSAVSDYFAAMFTNDVREAKEEEIKIEGVDPDALKALVHYAYTG 244

  Fly   139 FIEMREDTVETLLATACLLQLNAVVTACCNFLARQLHPSNCLGFAFFAEQQSCTTLLRLAQAYTC 203
            .:|::|||:|:|||.||||||:.|:..|||||.:|||||||||...|.:.|.|..|||:|.:||.
 Frog   245 VLELKEDTIESLLAAACLLQLSQVIDVCCNFLMKQLHPSNCLGIRSFGDAQGCVELLRVAHSYTM 309

  Fly   204 QYFMQVCQNQEFFQLNADQLGKLLSSDDLNVPSEQDVFHSLMSWVRHDSAAREQHIPELLALVRL 268
            ::|::|.:||||..|.|.::.|||||||:|||.|:.:|.:||.||:||...|::.:..||:.:||
 Frog   310 EHFIEVIRNQEFLLLPASEIAKLLSSDDINVPDEETIFQALMQWVKHDIQCRQRDLGMLLSYIRL 374

  Fly   269 PLLQPAFIMDHVEN---VCNANECQQLVMEAFKWHLMPERRSRIATERTTPRKSTVGRLLAVGGM 330
            |||.|..:.| :||   ..|..|||:.:|||.|:||:|||||.:.:.||.|||||||.|.|||||
 Frog   375 PLLPPQLLAD-LENSPMFANDLECQKFLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGM 438

  Fly   331 DAHKGAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMA 395
            ||.|||.:||.|..|.:.|.....|.|||||||.||:::||.:|||||||||.||||..:..|..
 Frog   439 DATKGATTIEKYDLRTNSWIQISTMNGRRLQFGVAVIDNKLYVVGGRDGLKTSNTVECFNPVTKV 503

  Fly   396 WAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAV 460
            |:.:..|:|.||||||||||||:||||||||||||||||||||.||.|:|||.||:.|||.|||.
 Frog   504 WSIMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAA 568

  Fly   461 LGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNP 525
            |..:||||||||||.|.:|:||:||||||||:.:||::|||||||...||||||:||||.||||.
 Frog   569 LNSKLYAVGGRDGSSCLKSMECFDPHTNKWSMCSPMSKRRGGVGVATYNGFLYAVGGHDAPASNH 633

  Fly   526 MVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGGYDGNHALKSVEEYDPVRNGW 590
            ....::.||||||.||.||::..|::.|||:|.:.|||||..||||||...|..||.||...|.|
 Frog   634 CSRLSDCVERYDPKTDNWTMVAPLSIPRDAVGVSPLGDRLYAVGGYDGQSYLNIVESYDAQTNEW 698

  Fly   591 NELAPMAFARAGAC--VVAIP 609
            .:...:...|||||  |:.:|
 Frog   699 TQDVSLNIGRAGACLEVIKLP 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045 58/99 (59%)
PHA03098 71..591 CDD:222983 309/522 (59%)
BACK 179..281 CDD:285009 48/101 (48%)
Kelch 323..369 CDD:128874 26/45 (58%)
KELCH repeat 359..402 CDD:276965 24/42 (57%)
Kelch 370..416 CDD:128874 28/45 (62%)
KELCH repeat 406..449 CDD:276965 38/42 (90%)
Kelch 418..463 CDD:128874 35/44 (80%)
KELCH repeat 453..497 CDD:276965 30/43 (70%)
Kelch 464..510 CDD:128874 31/45 (69%)
Kelch_1 499..546 CDD:279660 31/46 (67%)
KELCH repeat 500..549 CDD:276965 30/48 (63%)
KELCH repeat 553..596 CDD:276965 22/42 (52%)
Kelch 564..610 CDD:128874 22/48 (46%)
klhl4NP_001096427.1 BTB_POZ_KLHL4 164..289 CDD:349645 73/126 (58%)
PHA03098 177..701 CDD:222983 310/526 (59%)
KELCH repeat 467..510 CDD:276965 24/42 (57%)
KELCH repeat 514..558 CDD:276965 38/43 (88%)
KELCH repeat 561..604 CDD:276965 29/42 (69%)
KELCH repeat 608..657 CDD:276965 30/48 (63%)
KELCH repeat 661..699 CDD:276965 21/37 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5350
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 691 1.000 Inparanoid score I676
OMA 1 1.010 - - QHG48972
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 1 1.000 - - otm49417
Panther 1 1.100 - - O PTHR24412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

Return to query results.
Submit another query.