DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94b and Ir40a

DIOPT Version :9

Sequence 1:NP_732700.2 Gene:Ir94b / 318728 FlyBaseID:FBgn0051424 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:612 Identity:119/612 - (19%)
Similarity:204/612 - (33%) Gaps:177/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNNCSLQNW-NAHGMGIIR-----------TNDQGKLIMKDTFNSRTLAIICIGQNSHITLLRNV 105
            |:...|.|| :...:|:.|           .|.:|:......|:|...        ..:|...|.
  Fly   181 DSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPW--------FWVTYCNNS 237

  Fly   106 FE------TFGKVQQKKIILWTQMELKEKFFQEISKKSRDLKLLNLLVLKAVTKDKLLIYRLNPF 164
            ||      :...::::|:.:               ...||.:||.||       .|.:.:|....
  Fly   238 FEEDEEFNSLDSIEKRKVRV---------------TGGRDHRLLMLL-------SKHMNFRFKYI 280

  Fly   165 PSPHFKRIENIWTPNDTLFMDTKFNFHGMTAVVKH---DY-------NWTIQMGNIRKFPISRIE 219
            .:|  .|.:......|.  .|:..:|.|...:::.   |:       :|               |
  Fly   281 EAP--GRTQGSMRSEDG--KDSNDSFTGGIGLLQSGQADFFLGDVGLSW---------------E 326

  Fly   220 DKEVIEFALKYNLTLQFFN--DVERFDIELRKRIILKSNSTQPIDSGI-PMVFSSLLIVVPCGNY 281
            .::.|||:        ||.  |...|.....:|:.......:|....| |.:..:::...|.   
  Fly   327 RRKAIEFS--------FFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPI--- 380

  Fly   282 LSIQDVIKVSGI--EKWI---------FYIILVYVIFVLIEIT--FLGV---TILISRQSRHQMI 330
              ...:|.:..|  .:|.         .||.:.|    |.|||  .|.:   |:|    |.||| 
  Fly   381 --FYGIIALPYIWRRRWANSDVEHLGELYIHMTY----LKEITPRLLKLKPRTVL----SAHQM- 434

  Fly   331 PNTLVNLC---AFRAILGLPFPETRRTSLSLRQLFLAIALFGMIFSIFI-----NCKLSSMLTNP 387
            |:.|...|   ..|..|.....|...   ..|..||.|..:  |.:.::     :.:|:|....|
  Fly   435 PHQLFQKCIWFTLRLFLKQSCNELHN---GYRAKFLTIVYW--IAATYVLADVYSAQLTSQFARP 494

  Fly   388 CPRPQVNNFEELKTSGLTVVMDHDAEN-FIEKEI--------GVDFFNQYM----------PRKV 433
            ...|.:|..:.|:.:     |.||... ::|||.        |.:.|.|..          |:..
  Fly   495 AREPPINTLQRLQAA-----MIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGF 554

  Fly   434 TLTFTERAKLLFSLKGNHAFTLFSES--FAIIESY-----QRSKGLRAHCTSEDLIVAERV--PR 489
            .:...|....|.:..|.....|....  |..::.|     |.|:.|....::    ||.::  |.
  Fly   555 FIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSA----VAVQIGCPF 615

  Fly   490 IYILEN-------NSILDR-PLRRFIRQMQESGITNHWLKNIPSSLEKNLMQITIPYDRERVHPL 546
            :..|.|       :.|||: ....:.:|.||...|..: |....:........|..||...:.||
  Fly   616 LGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIY-KGSVQAKNSEAYSRTESYDSTVISPL 679

  Fly   547 SIEHLTWLWCILILGYSISMIVFFVEM 573
            ::..|...:..|.:|...:.::..:|:
  Fly   680 NLRMLQGAFIALGVGSLAAGVILLLEI 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94bNP_732700.2 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 29/178 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 19/121 (16%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/149 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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