DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94c and Ir100a

DIOPT Version :9

Sequence 1:NP_732701.2 Gene:Ir94c / 318727 FlyBaseID:FBgn0051423 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:717 Identity:131/717 - (18%)
Similarity:250/717 - (34%) Gaps:248/717 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKVFKLLVLPLIYLSLTKGSKNPQLKFLRELINVIEEGREI-------------------RTIM 46
            |:...:|::|.|:..:|.:.:.....:.|..::..:|.|.|:                   ::.:
  Fly     1 MATTLQLIMLALVGGTLGQANNTDHKQVLTSIVKQLEGGLELHLRTSEDGGNDLVQFLMQEKSSI 65

  Fly    47 VIKHSRDEYCHLDQWNPRGSPILR--------TNEMGSIRISGYFNDQAVILACMGENS----DY 99
            :|...::|.       |..:.|:|        .::|..||.|.:..|...|||.  ||:    |.
  Fly    66 IISAKQEEV-------PSRAKIMRHHFFIFDGVHQMQEIRTSLFNTDGFYILAL--ENNTIEDDV 121

  Fly   100 GLLKSLANAMDNMRQERIILWSEREPTKMLMDYISQQAD-RYN-FAQIIIVTMN--------EDV 154
            .|::..|:           :|.:...:::....:|:::. .:| |.|.::|..:        :|:
  Fly   122 LLMEFAAD-----------VWLQHGHSRIYYVQLSKKSVLLFNPFLQRLVVVQDSKTYSRIYKDL 175

  Fly   155 DAVPSLHQLNPYPTPRFRQITNISNIRRTSFFGCG----LSFQGKTAILKESVVSNIRFK---VW 212
            :.    :.|..|          |.:...:|..|.|    ||..|..|.|.::|...:.|.   ||
  Fly   176 EG----YHLRIY----------IFDSVYSSVIGDGENKVLSVTGADAKLAKTVARQLNFTADFVW 226

  Fly   213 SP-------------SGPIPLSE------------LKDY--EIVQF-AVKYNLSLKLYDQNESKS 249
            ..             ||.:..:.            :|||  ..:|| |..|...|.||   ..|:
  Fly   227 PDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSAAVYMDELCLY---VKKA 288

  Fly   250 DHFDIQLGPLFITKDFPTQMAFVSPNTACSLIVIVPCSPKWRFMDVLHKLGVLKLIGCLL----- 309
            ......:.|||         |.......|.|:|.:..:..|.         :|:.:..:|     
  Fly   289 QRIPQSILPLF---------AVHMDVWLCFLLVGLLGALVWL---------ILRAVNLILGIEGV 335

  Fly   310 --------IAY---AVFVLIETLILWLTHRISGREVRLTSLNQLLNPRAFRGILGLPFPEFRRSS 363
                    |:|   |..:.::|.::|:...: ||                       ||.|....
  Fly   336 PDGSRATRISYFGAARRIFVDTWVIWVRVNV-GR-----------------------FPPFHSER 376

  Fly   364 ISLRQLFLVISVFGLVYSNFVSCTLSALLTKPAQNPQVRNFKELRDSGLITIMDKYTHSFIEKH- 427
            |.:..|.||..:||.:    :..:|:.:..:|.....|...:||.:||         .....|| 
  Fly   377 IFVASLCLVSVIFGAL----LESSLATVYIRPLYYRDVNTLRELDESG---------QPIYIKHP 428

  Fly   428 --IDPEFFDHVLPHY--------LILQKKEALRMIWNFNDSYSYVMYTTTWKSLNTVQKSFDERV 482
              .|..|:.|....|        |:.:.:|.|..:.:....::.|..:.:.: |:.::....::|
  Fly   429 AFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRGGFAGVTRSASLQ-LSDIRYVMTKKV 492

  Fly   483 F----CESESLTIAWNLPR--MYVLGNNSVL--------------------KWMLSRYITYMPQT 521
            .    | .::..||:.|||  .|:...|.::                    ||.:.|:..|:.:.
  Fly   493 HKIPEC-PKNYHIAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTGEAKERAKWSIQRFPEYLAEL 556

  Fly   522 GIPDSWTEQLPKVLKLLYNVTSPRRIKEGAVPLSIQHLSWIWHLLFIGESIATLVFIVEILLQKS 586
            .: ..|     ||                   |::..:...::.|.||..::.:|.:.||||.:.
  Fly   557 DV-GRW-----KV-------------------LTLSDVQLAFYALTIGCLLSAIVCMAEILLGRQ 596

  Fly   587 NQ 588
            .:
  Fly   597 RR 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94cNP_732701.2 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 7/44 (16%)
Lig_chan <439..580 CDD:278489 25/167 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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