DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94c and Ir40a

DIOPT Version :9

Sequence 1:NP_732701.2 Gene:Ir94c / 318727 FlyBaseID:FBgn0051423 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:497 Identity:94/497 - (18%)
Similarity:163/497 - (32%) Gaps:193/497 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 FFG-CGLSFQGKTAI--------------------LKESVVSNIRFK--VWSP-------SGPIP 219
            |.| .|||::.:.||                    |.|::.....||  :|..       |||| 
  Fly   317 FLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPI- 380

  Fly   220 LSELKDYEIVQFAVKYNLSLKLYDQNESKSD--HFDIQLGPLFI----TKDFPTQMAFVSPNTAC 278
                 .|.|:  |:.|     ::.:..:.||  |    ||.|:|    .|:...::..:.|.|..
  Fly   381 -----FYGII--ALPY-----IWRRRWANSDVEH----LGELYIHMTYLKEITPRLLKLKPRTVL 429

  Fly   279 SLIVIVPCSPKWRFMDVLHKLGVLKLIGCLLIAYAVFVLIETLILWLTHRISGREVRLTSLNQLL 343
            |                .|::.......|               :|.|.|:..::    |.|:|.
  Fly   430 S----------------AHQMPHQLFQKC---------------IWFTLRLFLKQ----SCNELH 459

  Fly   344 NPRAFRGILGLPFPEFRRSSISLRQLFLVISVFGL----VYSNFVSCTLSALLTKPAQNPQVRNF 404
            |                    ..|..||.| |:.:    |.::..|..|::...:||:.|.:...
  Fly   460 N--------------------GYRAKFLTI-VYWIAATYVLADVYSAQLTSQFARPAREPPINTL 503

  Fly   405 KELRDSGLITIMDKYTHSFIEKHIDPEFFDHVLPHYLILQKKEALRMIWNFNDSYSYVMYTTTWK 469
            :.|:.:   .|.|.| ..::||                  :..:|.|:.|..:.:..:......:
  Fly   504 QRLQAA---MIHDGY-RLYVEK------------------ESSSLEMLENGTELFRQLYALMRQQ 546

  Fly   470 SLNTVQKSF----------------DERVFCESESLTIAWNLPRMYVLGNNSVLKWMLSRYITYM 518
            .:|..|..|                |:.|....|  |:.:|: :.|...|..:.:.:.:||....
  Fly   547 VINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRE--TLFFNV-QQYGSNNFQLSQKLYTRYSAVA 608

  Fly   519 PQTGIPDSWTEQLPKVLKLL-----------------YNVTSPRRIKEGAV-------------- 552
            .|.|.|  :...|..||..|                 |......||.:|:|              
  Fly   609 VQIGCP--FLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESY 671

  Fly   553 ------PLSIQHLSWIWHLLFIGESIATLVFIVEILLQKSNQ 588
                  ||:::.|...:..|.:|...|.::.::||:..|.:|
  Fly   672 DSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEIVFIKLDQ 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94cNP_732701.2 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 7/20 (35%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/86 (23%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 29/167 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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