DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gba1b and GBA

DIOPT Version :9

Sequence 1:NP_001097888.1 Gene:Gba1b / 318721 FlyBaseID:FBgn0051414 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_000148.2 Gene:GBA / 2629 HGNCID:4177 Length:536 Species:Homo sapiens


Alignment Length:569 Identity:184/569 - (32%)
Similarity:282/569 - (49%) Gaps:65/569 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLGFLTTVIAISAGAPDW---QLPCDLRETSHGS-VCVCNSTYCDYLEPPQLTDISQIVVISSSK 68
            :.|.||.::.:.  |..|   ..||..:...:.| |||||:||||..:||....:.......|::
Human    21 MAGSLTGLLLLQ--AVSWASGARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTR 83

  Fly    69 DGLRFKKTTGDLSKKKPITIDDKQFTDENFKADAIVVDQERAWLQLANIPQSLFINASIKTYRIF 133
            .|.|.:.:.|      ||        ..|.....::                           :.
Human    84 SGRRMELSMG------PI--------QANHTGTGLL---------------------------LT 107

  Fly   134 VKREQSFQNVSIFGGAFTGTVSYLLKELPVELQDHVYRSYFHPVGIAYNTIRMSIGGSDFDMEPW 198
            ::.||.||.|..||||.|...:..:..|....|:.:.:|||...||.||.||:.:...||.:..:
Human   108 LQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTY 172

  Fly   199 AYNELPLHDPKLSNFTELDPRDLQKVEQLKR-LKIIGKVDSLKIMGAAWSAPTWMKSNNRWTGFG 262
            .|.:.| .|.:|.||:..:.....|:..:.| |::..:..||  :.:.|::|||:|:|....|.|
Human   173 TYADTP-DDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSL--LASPWTSPTWLKTNGAVNGKG 234

  Fly   263 QLKSE----YYQTWALYHLKFLELMRSKNMPIWAISTGNEPLNGVIGFFFVHFMSMGWTPWQQAI 323
            .||.:    |:||||.|.:|||:......:..||::..|||..|::..:  .|..:|:||..|..
Human   235 SLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGY--PFQCLGFTPEHQRD 297

  Fly   324 WLNDNLGPTIRNSAESKVLIFGNDDQRYTYPTWFRKMRSSRNNSLNYLDGLAVHWYWDELI-GPQ 387
            ::..:||||:.||....|.:...||||...|.| .|:..:...:..|:.|:|||||.|.|. ...
Human   298 FIARDLGPTLANSTHHNVRLLMLDDQRLLLPHW-AKVVLTDPEAAKYVHGIAVHWYLDFLAPAKA 361

  Fly   388 LIDQAHTDMPNKLLLNTESCIGDKPWQTHGPELGSWQRGESYMRAYTQDLTHNFNGWLDWNLVLD 452
            .:.:.|...||.:|..:|:|:|.|.|: ....||||.||..|..:...:|.::..||.||||.|:
Human   362 TLGETHRLFPNTMLFASEACVGSKFWE-QSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALN 425

  Fly   453 EQGGPNYVKNFVDAPIIVNATSRSEIYKQPIFYAIGHFSKFLPPDSVRIETRIENQSNPFTQLSV 517
            .:||||:|:||||:||||:.| :...||||:||.:||||||:|..|.|:.. :.:|.|   .|..
Human   426 PEGGPNWVRNFVDSPIIVDIT-KDTFYKQPMFYHLGHFSKFIPEGSQRVGL-VASQKN---DLDA 485

  Fly   518 VGFQRPDGSVALIIYNGQNLPVDVTLDDSQRGAIQLRLPPRSWHTVLYK 566
            |....||||..:::.|..:..|.:|:.|...|.::...|..|.||.|::
Human   486 VALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gba1bNP_001097888.1 Glyco_hydro_30 28..559 CDD:304972 175/537 (33%)
GBANP_000148.2 Glyco_hydro_30 117..466 CDD:307945 132/356 (37%)
Glyco_hydro_30C 469..531 CDD:319207 18/65 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158304
Domainoid 1 1.000 240 1.000 Domainoid score I2262
eggNOG 1 0.900 - - E1_COG5520
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I2758
Isobase 1 0.950 - 0 Normalized mean entropy S4252
OMA 1 1.010 - - QHG62715
OrthoDB 1 1.010 - - D206521at33208
OrthoFinder 1 1.000 - - FOG0004266
OrthoInspector 1 1.000 - - otm40726
orthoMCL 1 0.900 - - OOG6_102859
Panther 1 1.100 - - LDO PTHR11069
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3004
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.720

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