DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and ZNF18

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_653281.2 Gene:ZNF18 / 7566 HGNCID:12969 Length:549 Species:Homo sapiens


Alignment Length:162 Identity:44/162 - (27%)
Similarity:74/162 - (45%) Gaps:29/162 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 CKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEKHLCPICQKVFRR 167
            |:|||:.|..:|.|.:|..:|..::...|::|.|:|.:.....:|..||..||.    |      
Human   410 CRECGKTFYRNSQLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQRTHTGEKP----C------ 464

  Fly   168 KSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLH 232
                              ||:.|.|.|.:.:.|..|.:.|.... .:.|.:|:|||::::....|
Human   465 ------------------KCDYCGKGFSDFSGLRHHEKIHTGEK-PYKCPICEKSFIQRSNFNRH 510

  Fly   233 MKRHSNRERQSCSLCGKSYNDPDALGRHLRQH 264
            .:.|:..:...||.||||::...:|.:|.|.|
Human   511 QRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSH 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 39/153 (25%)
C2H2 Zn finger 131..151 CDD:275368 5/19 (26%)
C2H2 Zn finger 158..178 CDD:275368 1/19 (5%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 9/19 (47%)
C2H2 Zn finger 272..290 CDD:275368
ZNF18NP_653281.2 SCAN 37..148 CDD:128708
KRAB 222..270 CDD:214630
zf-C2H2 409..430 CDD:395048 8/19 (42%)
C2H2 Zn finger 410..430 CDD:275368 8/19 (42%)
COG5048 <436..549 CDD:227381 35/136 (26%)
C2H2 Zn finger 438..458 CDD:275368 5/19 (26%)
C2H2 Zn finger 466..486 CDD:275368 6/19 (32%)
zf-H2C2_2 482..503 CDD:463886 7/21 (33%)
C2H2 Zn finger 494..514 CDD:275368 6/19 (32%)
zf-H2C2_2 506..530 CDD:463886 8/23 (35%)
C2H2 Zn finger 522..542 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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