DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and znf1117

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001314925.1 Gene:znf1117 / 565962 ZFINID:ZDB-GENE-110914-52 Length:293 Species:Danio rerio


Alignment Length:240 Identity:84/240 - (35%)
Similarity:114/240 - (47%) Gaps:20/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CLEC--RVARSVDIQETQETQARTSADKRIIVTDKGYHCTVCNKDF--RSRTQQYYHLTCGNDLL 98
            |.:|  ...|..|::          ...||...:|.|.||.|.|.|  .|...|:..:..|.   
Zfish    68 CTQCGKNFGRKGDLK----------IHMRIHTGEKPYICTQCGKSFSISSNLNQHMRIHTGE--- 119

  Fly    99 KKFNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEKHL-CPICQ 162
            |.|.|.:||:.|:.||||.||:|.|..:...:||.|.|||.....|.:||..|..||.. |..|.
Zfish   120 KPFTCTQCGKSFSQSSHLNYHMMIHAGEKPSTCSQCGKSFSCLSHLNKHMRIHTGEKPFSCTQCG 184

  Fly   163 KVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQT 227
            |.||....|..|:.|||. ...|.|.||.|.|...::||.|:|.|.... ...|..|:|||.|.:
Zfish   185 KSFRHSLFLKQHMRIHSG-EKPFTCTLCGKSFSQSSSLNHHMRIHTGEK-PFTCTQCRKSFRRSS 247

  Fly   228 TLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRC 272
            :|:.||:.|:..:..:|:.||||:.....|.||:|.|...:.:.|
Zfish   248 SLKEHMRIHTGEKPFTCTRCGKSFIQSSQLNRHMRIHTGEKPFTC 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/21 (33%)
C2H2 Zn finger 103..123 CDD:275368 11/19 (58%)
COG5048 <112..288 CDD:227381 62/162 (38%)
C2H2 Zn finger 131..151 CDD:275368 9/19 (47%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 187..207 CDD:275368 9/19 (47%)
C2H2 Zn finger 216..236 CDD:275368 9/19 (47%)
C2H2 Zn finger 244..264 CDD:275368 9/19 (47%)
C2H2 Zn finger 272..290 CDD:275368 1/1 (100%)
znf1117NP_001314925.1 C2H2 Zn finger 68..88 CDD:275368 5/29 (17%)
zf-H2C2_2 80..104 CDD:463886 9/33 (27%)
C2H2 Zn finger 96..116 CDD:275368 7/19 (37%)
COG5048 <106..292 CDD:227381 70/190 (37%)
C2H2 Zn finger 124..144 CDD:275368 11/19 (58%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
C2H2 Zn finger 264..284 CDD:275368 9/19 (47%)

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