DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42726 and zfx

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_021325975.1 Gene:zfx / 560346 ZFINID:ZDB-GENE-061220-2 Length:739 Species:Danio rerio


Alignment Length:269 Identity:70/269 - (26%)
Similarity:110/269 - (40%) Gaps:20/269 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CLECRVARSVDIQETQETQARTSADKRIIVTDKGYHCTVCNKDFR------SRTQQYYH----LT 92
            |.:|      |....::.......:...:.:...:.|.||.|:|.      |...|::|    |.
Zfish   376 CTDC------DFTTNKKVSLHNHMEIHTLSSKAPFECEVCGKEFHQQAALFSHRLQHHHREAKLQ 434

  Fly    93 CGNDLLKKFNCKECGRRFATSSHLKYHLMS-HEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEK- 155
            ......|...||.|....|....|..||:: |.|...|.|..|.|.|:.|..|::||.||..|| 
Zfish   435 ISPPTTKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRTHTGEKP 499

  Fly   156 HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQ 220
            :.|..|.......|:|.:|:.......:.:||:.|.:.|.....|.||...|::.. .|.|..|.
Zfish   500 YSCLYCDYKSADSSNLKTHVKTKHSKEMPYKCDRCFQTFAEPEELLQHSLTHEEAK-THQCTHCD 563

  Fly   221 KSFLRQTTLRLH-MKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRCIQCDITINRKDN 284
            ......:.|:.| :..|:......|.:|||.::.|..|.:|...||..:.::|..|:..|.....
Zfish   564 HKSSNSSDLKRHIISVHTKDYPHKCEVCGKGFHRPSELKKHSAAHKAKKLHQCRHCNFKIADPFV 628

  Fly   285 MLRHLRSMH 293
            :.||:.|:|
Zfish   629 LSRHILSVH 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 9/29 (31%)
C2H2 Zn finger 103..123 CDD:275368 7/20 (35%)
COG5048 <112..288 CDD:227381 49/178 (28%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
Chordopox_A33R 151..>254 CDD:283591 26/104 (25%)
C2H2 Zn finger 158..178 CDD:275368 5/19 (26%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 4/20 (20%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..290 CDD:275368 5/17 (29%)
zfxXP_021325975.1 Zfx_Zfy_act 27..327 CDD:309717
C2H2 Zn finger 344..364 CDD:275368
C2H2 Zn finger 376..396 CDD:275368 3/25 (12%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 445..466 CDD:275368 7/20 (35%)
COG5048 467..>605 CDD:227381 39/138 (28%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
C2H2 Zn finger 502..523 CDD:275368 5/20 (25%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..580 CDD:275368 4/20 (20%)
C2H2 Zn finger 588..608 CDD:275368 7/19 (37%)
C2H2 Zn finger 616..633 CDD:275368 4/16 (25%)
C2H2 Zn finger 682..703 CDD:275368
C2H2 Zn finger 711..731 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.