DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and prdm5

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001002301.2 Gene:prdm5 / 432371 ZFINID:ZDB-GENE-040708-1 Length:634 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368
COG5048 <112..288 CDD:227381
C2H2 Zn finger 131..151 CDD:275368
Chordopox_A33R 151..>254 CDD:283591
C2H2 Zn finger 158..178 CDD:275368
C2H2 Zn finger 187..207 CDD:275368
C2H2 Zn finger 216..236 CDD:275368
C2H2 Zn finger 244..264 CDD:275368
C2H2 Zn finger 272..290 CDD:275368
prdm5NP_001002301.2 SET 22..125 CDD:214614
C2H2 Zn finger 171..192 CDD:275368
C2H2 Zn finger 204..223 CDD:275368
C2H2 Zn finger 240..291 CDD:275368
COG5048 266..626 CDD:227381
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 339..363 CDD:290200
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
C2H2 Zn finger 410..430 CDD:275368
C2H2 Zn finger 438..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
C2H2 Zn finger 495..515 CDD:275368
zf-H2C2_2 508..531 CDD:290200
C2H2 Zn finger 523..543 CDD:275368
zf-H2C2_2 536..560 CDD:290200
C2H2 Zn finger 551..571 CDD:275368
zf-H2C2_2 564..587 CDD:290200
C2H2 Zn finger 579..599 CDD:275368
C2H2 Zn finger 608..625 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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