DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and MTF-1

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001097560.1 Gene:MTF-1 / 39089 FlyBaseID:FBgn0040305 Length:1006 Species:Drosophila melanogaster


Alignment Length:507 Identity:113/507 - (22%)
Similarity:186/507 - (36%) Gaps:156/507 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PRCNCD---ATGQNRLVTDSCGHTKCRLCLVADVSDCLECRVARSVDIQETQETQARTSADKRII 66
            |..|||   .|| |.:..||..::.....:.....|        ..|..|..|       |:::.
  Fly   240 PPINCDNDQGTG-NSISRDSTSNSPAYFTIETSYVD--------EYDPNEPDE-------DEQLA 288

  Fly    67 VTDKGYHCT---VCNKDF-------RSRTQQYYHLT--CGNDLLKKFNC--KECGRRFATSSHLK 117
                  ||.   |.::|.       :....|...|.  ..::.|.::.|  :.|.|.::|..:|:
  Fly   289 ------HCIQPGVLHQDVDEEEVERQDENDQLMALAYESSDEALSRYRCNYENCYRSYSTIGNLR 347

  Fly   118 YHLMSHEKQSKHSC--SVCHKSFKQPIVLQRHMLTHNQEK-HLCPI--CQKVFRRKSSLASHLAI 177
            .||.:|.......|  ..|||:|.....|:.|:..|.:.| :.|.:  |.|.|..:..|.:||.:
  Fly   348 THLKTHTGDYSFKCPEDGCHKAFLTSYSLKIHVRVHTKVKPYECEVSGCDKAFNTRYRLHAHLRL 412

  Fly   178 HSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKV--CQKSFLRQTTLRLHMKRHSNRE 240
            |:  |..|.||||.|.|...::|.:|:|.|.:.. .:.|..  |.|:|.....|:.|.:.|:..:
  Fly   413 HN--GETFNCELCQKCFTTLSDLKKHMRTHTQER-PYKCPEDDCGKAFTASHHLKTHRRTHTGEK 474

  Fly   241 RQSC--SLCGKSYNDPDALGRHLRQHKTAERYRCIQCDITINRKDNMLRHLRSMHPGCAFASTVE 303
            ...|  ..|.||::...:|..|.:.|:.           .:..|....|.|::....|   |..|
  Fly   475 PYPCQEDSCQKSFSTSHSLKSHKKTHQR-----------QLQNKGRKKRPLKTQQTKC---SDQE 525

  Fly   304 MVTPRSSAQEAT--TAEERP-----------SQTVRYNS--VIQSV-------------GNVEPV 340
            ...|:...||..  ..|::|           |:|...:|  |:|::             || ||:
  Fly   526 QKDPQQEEQEEEEFIKEDQPEMTLLNPGSHCSETTSTDSGVVLQTLTPQDHLSNVFILQGN-EPL 589

  Fly   341 ML--------------------------LQSTP-------------LPSQLP---ELQMEKGKAV 363
            :|                          |.|.|             ||:::|   .|:...|.||
  Fly   590 ILPETSQAYQLSYAAEEEIPSPWIDAGVLVSKPIIPMAPLTDACVALPTEMPSFVNLKPTFGNAV 654

  Fly   364 PEHL--PLPDVMPEENVQLYRKIILDLDNEEYSSEPSPDAQEPAMQHHQPRV 413
            ..::  |.|:.|             |:|....:|.|:     |.::.:||.:
  Fly   655 SGNMGDPQPETM-------------DVDPTVETSLPT-----PTLELNQPNI 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 5/31 (16%)
C2H2 Zn finger 103..123 CDD:275368 7/21 (33%)
COG5048 <112..288 CDD:227381 49/184 (27%)
C2H2 Zn finger 131..151 CDD:275368 7/21 (33%)
C2H2 Zn finger 158..178 CDD:275368 7/21 (33%)
C2H2 Zn finger 187..207 CDD:275368 9/19 (47%)
C2H2 Zn finger 216..236 CDD:275368 6/21 (29%)
C2H2 Zn finger 244..264 CDD:275368 6/21 (29%)
C2H2 Zn finger 272..290 CDD:275368 2/17 (12%)
MTF-1NP_001097560.1 COG5048 <319..498 CDD:227381 51/181 (28%)
C2H2 Zn finger 331..353 CDD:275368 7/21 (33%)
C2H2 Zn finger 361..383 CDD:275368 7/21 (33%)
C2H2 Zn finger 391..413 CDD:275368 7/21 (33%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
C2H2 Zn finger 448..470 CDD:275368 6/21 (29%)
C2H2 Zn finger 478..500 CDD:275368 6/21 (29%)
PRK14954 <863..>941 CDD:184918
Blue background indicates that the domain is not in the aligned region.

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