DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42726 and CG12605

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:177 Identity:57/177 - (32%)
Similarity:88/177 - (49%) Gaps:17/177 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 HLTCGN--DLLKK----FNCKECGRRFATSSHLKYHLMSH---EKQSKHSCSVCHKSFKQPIVLQ 145
            |.:.||  :..|:    :.|.|||:::||||:|..|..:|   :.||...|:.|.|::.....|.
  Fly   422 HSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALA 486

  Fly   146 RHMLTHNQEKHLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKH--D 208
            .|:||| :..|.|.||.|:|.|...|..||..|:. ...:.|..|.|.|.:::||..|::.|  |
  Fly   487 MHLLTH-KLSHSCDICGKLFSRPWLLQGHLRSHTG-EKPYACVHCGKAFADRSNLRAHMQTHSGD 549

  Fly   209 KNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPD 255
            ||   ..|..|.|:|..::.|..|::....|:..:... ||...:.|
  Fly   550 KN---FKCHRCNKTFALKSYLNKHLESACLRDAGAIDQ-GKGLEEED 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 1/3 (33%)
C2H2 Zn finger 103..123 CDD:275368 10/19 (53%)
COG5048 <112..288 CDD:227381 48/149 (32%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 158..178 CDD:275368 9/19 (47%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 3/12 (25%)
C2H2 Zn finger 272..290 CDD:275368
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 50/143 (35%)
zf-C2H2 439..461 CDD:395048 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275370 10/19 (53%)
C2H2 Zn finger 472..492 CDD:275368 6/19 (32%)
zf-C2H2 496..518 CDD:395048 10/21 (48%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 511..534 CDD:463886 7/23 (30%)
zf-C2H2 524..546 CDD:395048 7/21 (33%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 538..562 CDD:463886 10/26 (38%)
C2H2 Zn finger 554..571 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.