DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and CG11906

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster


Alignment Length:214 Identity:54/214 - (25%)
Similarity:83/214 - (38%) Gaps:39/214 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 LKKFNC--KECGRRFAT-SSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEKHLCP 159
            ||.|.|  .:||.:..| .:.:|:..|.|.|.|...|..|...|...:.|..||...|:..::|.
  Fly   441 LKSFTCFTPDCGYQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHMHLQNRGLYICH 505

  Fly   160 ICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRK--HDKNNIRHMCKVCQKS 222
            .|::.|..:..|..|..:|.. |:.:.|..|...|.::|.|..|.:|  |..|: ..:..: .:|
  Fly   506 KCREEFELQHQLDRHFQLHRK-GINYHCNFCRLEFLSEAKLLAHCKKLGHSPND-EPLISI-DRS 567

  Fly   223 FLRQTTLRLHMKRHSNRERQSCSLCGKSYND----------PDALGRHLRQHKTAERYRCIQCDI 277
            .   :.:..|:.|.|:..|     ..|||.:          |.....||.|||.. |:....|| 
  Fly   568 L---SIVNCHVPRSSDYSR-----IVKSYEEREFYIPRIPMPSTQPMHLPQHKPF-RFAIGICD- 622

  Fly   278 TINRKDNMLRHLRSMHPGC 296
                       ....:|.|
  Fly   623 -----------FEERNPNC 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368 6/22 (27%)
COG5048 <112..288 CDD:227381 46/188 (24%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 158..178 CDD:275368 5/19 (26%)
C2H2 Zn finger 187..207 CDD:275368 7/21 (33%)
C2H2 Zn finger 216..236 CDD:275368 2/19 (11%)
C2H2 Zn finger 244..264 CDD:275368 6/29 (21%)
C2H2 Zn finger 272..290 CDD:275368 2/17 (12%)
CG11906NP_611402.2 None
Blue background indicates that the domain is not in the aligned region.

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