DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp18

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001012008.1 Gene:Zfp18 / 303226 RGDID:1305130 Length:556 Species:Rattus norvegicus


Alignment Length:162 Identity:42/162 - (25%)
Similarity:72/162 - (44%) Gaps:29/162 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 CKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEKHLCPICQKVFRR 167
            |:|||:.|..:|.|.:|..:|..::...|.:|.|:|.:.....:|..||..||.    |      
  Rat   417 CRECGKTFYRNSQLVFHQRTHTGETYFHCRICKKAFLRSSDFVKHQRTHTGEKP----C------ 471

  Fly   168 KSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLH 232
                              ||:.|.|.|.:.:.|..|.:.|.... .:.|.:|:|||::::....|
  Rat   472 ------------------KCDYCGKGFSDFSGLRHHEKIHTGEK-PYKCPICEKSFIQRSNFNRH 517

  Fly   233 MKRHSNRERQSCSLCGKSYNDPDALGRHLRQH 264
            .:.|:..:...|:.|||.::...:|.:|.|.|
  Rat   518 QRVHTGEKPYKCTHCGKRFSWSSSLDKHQRSH 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 37/153 (24%)
C2H2 Zn finger 131..151 CDD:275368 5/19 (26%)
Chordopox_A33R 151..>254 CDD:283591 23/102 (23%)
C2H2 Zn finger 158..178 CDD:275368 1/19 (5%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..290 CDD:275368
Zfp18NP_001012008.1 SCAN 37..144 CDD:128708
SCAN 37..125 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..195
KRAB_A-box 226..256 CDD:143639
C2H2 Zn finger 417..437 CDD:275368 8/19 (42%)
COG5048 <428..521 CDD:227381 28/121 (23%)
zf-H2C2_2 433..454 CDD:290200 6/20 (30%)
C2H2 Zn finger 445..465 CDD:275368 5/19 (26%)
zf-H2C2_2 457..481 CDD:290200 10/51 (20%)
C2H2 Zn finger 473..493 CDD:275368 6/19 (32%)
zf-H2C2_2 486..510 CDD:290200 8/24 (33%)
COG5048 497..>549 CDD:227381 14/52 (27%)
C2H2 Zn finger 501..521 CDD:275368 6/19 (32%)
zf-H2C2_2 513..537 CDD:290200 6/23 (26%)
zf-C2H2 527..549 CDD:278523 7/21 (33%)
C2H2 Zn finger 529..549 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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