DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp444

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001162614.1 Gene:Zfp444 / 292569 RGDID:1304847 Length:333 Species:Rattus norvegicus


Alignment Length:139 Identity:45/139 - (32%)
Similarity:55/139 - (39%) Gaps:19/139 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SCSVCHKSFKQPIVLQRHMLTHNQEK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKH 193
            ||..|.||..:|..|.||..:|:.|| |.||.|.|.||||..|..|...|               
  Rat   189 SCPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTH--------------- 238

  Fly   194 FQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALG 258
               ..:....||........|.|..|.|:|..:..|..|.|.||.....:|..|||.:...:.:.
  Rat   239 ---PGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVL 300

  Fly   259 RHLRQHKTA 267
            ||.|.|..|
  Rat   301 RHQRIHGRA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368
COG5048 <112..288 CDD:227381 45/139 (32%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
Chordopox_A33R 151..>254 CDD:283591 31/103 (30%)
C2H2 Zn finger 158..178 CDD:275368 10/19 (53%)
C2H2 Zn finger 187..207 CDD:275368 2/19 (11%)
C2H2 Zn finger 216..236 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..290 CDD:275368
Zfp444NP_001162614.1 SCAN 26..103 CDD:280241
COG5048 <188..>286 CDD:227381 36/114 (32%)
C2H2 Zn finger 190..210 CDD:275368 8/19 (42%)
zf-H2C2_2 202..227 CDD:290200 12/24 (50%)
C2H2 Zn finger 218..238 CDD:275368 10/19 (53%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
zf-H2C2_2 270..295 CDD:290200 9/24 (38%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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