DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp444

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001162614.1 Gene:Zfp444 / 292569 RGDID:1304847 Length:333 Species:Rattus norvegicus


Alignment Length:139 Identity:45/139 - (32%)
Similarity:55/139 - (39%) Gaps:19/139 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SCSVCHKSFKQPIVLQRHMLTHNQEK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKH 193
            ||..|.||..:|..|.||..:|:.|| |.||.|.|.||||..|..|...|               
  Rat   189 SCPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTH--------------- 238

  Fly   194 FQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALG 258
               ..:....||........|.|..|.|:|..:..|..|.|.||.....:|..|||.:...:.:.
  Rat   239 ---PGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVL 300

  Fly   259 RHLRQHKTA 267
            ||.|.|..|
  Rat   301 RHQRIHGRA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368
COG5048 <112..288 CDD:227381 45/139 (32%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
C2H2 Zn finger 158..178 CDD:275368 10/19 (53%)
C2H2 Zn finger 187..207 CDD:275368 2/19 (11%)
C2H2 Zn finger 216..236 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..290 CDD:275368
Zfp444NP_001162614.1 SCAN 26..103 CDD:460417
COG5048 <188..>286 CDD:227381 36/114 (32%)
C2H2 Zn finger 190..210 CDD:275368 8/19 (42%)
C2H2 Zn finger 218..238 CDD:275368 10/19 (53%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
zf-C2H2 284..306 CDD:395048 7/21 (33%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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