DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp496

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_006246512.1 Gene:Zfp496 / 287361 RGDID:1304611 Length:580 Species:Rattus norvegicus


Alignment Length:202 Identity:67/202 - (33%)
Similarity:92/202 - (45%) Gaps:20/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QARTSADKRIIVTDKGYHCTVCNKDFRSRTQQYYHLTCGNDLLKKFNCKECGRRFATSSHLKYHL 120
            |:.|.....:..:.|.|.|..|.|.||.|.....||....: .|...|..||..|:.|..|..||
  Rat   384 QSNTRPGGEVQSSQKSYVCPSCGKAFRWRVNFIRHLRSRRE-QKPHKCSVCGELFSDSEDLDGHL 447

  Fly   121 MSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEKHLCPICQKVFRR--------KSSLASHLAI 177
            .:||.|..:.|:||.|||:    |..|:::| |..||.|..|:..::        :|:..:.|..
  Rat   448 ETHEAQKPYRCTVCGKSFR----LNSHLISH-QRIHLQPDKQQPLKKNEEDSLETESTGTNDLLE 507

  Fly   178 HSDLGLQFKCELCSKHFQNKANLNQHLRK-HDKNNIR-HMCKVCQKSFLRQTTL----RLHMKRH 236
            .|...|.|:|..|.|.||....|.:|.|. |.|:..| ..|:.|.|:|.:...|    ||||||.
  Rat   508 KSKAKLGFQCADCEKSFQRHDYLVRHRRHCHLKDETRPFQCRYCVKTFRQNYDLLRHERLHMKRR 572

  Fly   237 SNRERQS 243
            |.:...|
  Rat   573 SKQALNS 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 8/19 (42%)
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 50/146 (34%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
Chordopox_A33R 151..>254 CDD:283591 35/107 (33%)
C2H2 Zn finger 158..178 CDD:275368 4/27 (15%)
C2H2 Zn finger 187..207 CDD:275368 8/20 (40%)
C2H2 Zn finger 216..236 CDD:275368 10/23 (43%)
C2H2 Zn finger 244..264 CDD:275368 67/202 (33%)
C2H2 Zn finger 272..290 CDD:275368
Zfp496XP_006246512.1 SCAN 50..126 CDD:280241
KRAB_A-box 220..>248 CDD:143639
COG5048 <332..568 CDD:227381 60/189 (32%)
C2H2 Zn finger 402..422 CDD:275368 8/19 (42%)
C2H2 Zn finger 430..450 CDD:275368 8/19 (42%)
zf-H2C2_2 442..465 CDD:290200 10/22 (45%)
zf-C2H2 456..478 CDD:278523 10/26 (38%)
C2H2 Zn finger 458..478 CDD:275368 10/24 (42%)
C2H2 Zn finger 517..538 CDD:275370 8/20 (40%)
zf-C2H2 546..568 CDD:278523 6/21 (29%)
C2H2 Zn finger 548..568 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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