DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp13

DIOPT Version :10

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_063124608.1 Gene:Zfp13 / 287095 RGDID:1304577 Length:550 Species:Rattus norvegicus


Alignment Length:282 Identity:81/282 - (28%)
Similarity:127/282 - (45%) Gaps:33/282 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TQETQARTSADKRIIV-TDKG---YHCTVCNKDF----------RSRTQQYYHLTCGNDLLKKFN 102
            ::..:|.||.::.::. :|.|   |.|..|.|.|          |:.|.:           |.:.
  Rat   280 SEREEALTSGEESLVPDSDTGKKTYKCEQCGKGFSWHSHLVTHRRTHTGE-----------KPYT 333

  Fly   103 CKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEK-HLCPICQKVFR 166
            |.:||:||..||||..|.:.|..:..::|..|.|||.....|.:|...|..|| ::|..|.|.|.
  Rat   334 CTDCGKRFGRSSHLIQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQRIHTGEKPYVCDRCAKRFT 398

  Fly   167 RKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIR-HMCKVCQKSFLRQTTLR 230
            |:|.|.:|...|:. ....||.:|.|.|...:.|..|.|.|  ..:: :.|..|.|.|.:::.|.
  Rat   399 RRSDLVTHQGTHTG-AKPHKCPICGKCFTQSSALVTHQRTH--TGVKPYPCPECGKCFSQRSNLI 460

  Fly   231 LHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRCIQCDITINRKDNMLRHLRSMHPG 295
            .|.:.|:..:...|..||||::....|..|.|.|:....|.|..|..:.:|:.|:.||.:....|
  Rat   461 AHNRTHTGEKPYHCLDCGKSFSHSSHLTAHQRTHRGVRPYSCPLCGKSFSRRSNLHRHEKIHTTG 525

  Fly   296 CAFASTVEMVTPRSSAQEATTA 317
               ...:.|:...::|..|.||
  Rat   526 ---PKALAMLMLGAAAAGALTA 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 6/29 (21%)
C2H2 Zn finger 103..123 CDD:275368 10/19 (53%)
COG5048 <112..288 CDD:227381 55/177 (31%)
C2H2 Zn finger 131..151 CDD:275368 7/19 (37%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
C2H2 Zn finger 272..290 CDD:275368 6/17 (35%)
Zfp13XP_063124608.1 None

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