DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zscan20

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_808426.2 Gene:Zscan20 / 269585 MGIID:2679268 Length:1030 Species:Mus musculus


Alignment Length:293 Identity:79/293 - (26%)
Similarity:114/293 - (38%) Gaps:66/293 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ADKRIIVTDKGYHCTVCNKDFRSR----TQQYYHLTCGNDLLKKFNCKECGRRFATSSHLKYHLM 121
            |.:|...::|.|.|....|.|..|    |.|..|:  |.   |.:.|.|||:.|...|:|..|..
Mouse   714 APQRTHSSEKPYKCLGSGKSFSDRANLSTHQRIHI--GE---KPYRCLECGKSFNDPSNLITHQR 773

  Fly   122 SHEKQSKHSCSVCHKSFKQPIVLQRHMLTH-----NQ---------------------------- 153
            :|..:..:.|.:|.|||.|...|.:|...|     ||                            
Mouse   774 THTGEKPYKCGLCWKSFNQSSNLLKHQRVHLGGPPNQRDEPGENFGQSLSYSAHWRRNSTQEGPK 838

  Fly   154 --------------------EK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNK 197
                                || :.||.|.:.|.:.|:|.||..|||. ...::|.:|.|.|...
Mouse   839 EPQNISMGADSPGACHPNSGEKLYSCPECGRCFSKSSALTSHQRIHSG-EKPYECAVCGKSFSKS 902

  Fly   198 ANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLR 262
            ::|..|.|.|.... .|.|..|.|.|..::.|..|.:.|:..:...|..|||.:.|...|..|.|
Mouse   903 SSLANHRRTHTGEK-PHKCADCGKCFSERSKLITHQRVHTGEKPYECPECGKFFRDRSNLITHQR 966

  Fly   263 QHKTAERYRCIQCDITINRKDNMLRHLRSMHPG 295
            .|...:.|:|.:|....|:..:::.|.| :|.|
Mouse   967 IHTGEKPYKCRECGKCFNQSSSLIIHQR-IHTG 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/23 (30%)
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 57/229 (25%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
Chordopox_A33R 151..>254 CDD:283591 36/156 (23%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
C2H2 Zn finger 272..290 CDD:275368 4/17 (24%)
Zscan20NP_808426.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..42
SCAN 41..126 CDD:366881
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..201
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..285
Myb_DNA-bind_4 315..400 CDD:372747
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..441
Myb_DNA-bind_4 476..561 CDD:372747
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 578..600
COG5048 686..1020 CDD:227381 79/293 (27%)
C2H2 Zn finger 727..747 CDD:275368 6/19 (32%)
C2H2 Zn finger 755..775 CDD:275368 8/19 (42%)
C2H2 Zn finger 783..803 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 801..820 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 828..850 0/21 (0%)
C2H2 Zn finger 864..884 CDD:275368 8/19 (42%)
C2H2 Zn finger 892..912 CDD:275368 7/19 (37%)
C2H2 Zn finger 920..940 CDD:275368 6/19 (32%)
C2H2 Zn finger 948..968 CDD:275368 8/19 (42%)
C2H2 Zn finger 976..996 CDD:275368 5/20 (25%)
C2H2 Zn finger 1004..1024 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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