DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zscan26

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_017456272.1 Gene:Zscan26 / 266792 RGDID:727885 Length:465 Species:Rattus norvegicus


Alignment Length:299 Identity:81/299 - (27%)
Similarity:124/299 - (41%) Gaps:45/299 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DSCGHTKCRLCLVADV----------------------SDCLEC--RVARSVDIQETQETQARTS 60
            ||||..:.. |.:::.                      |.|||.  |:.::..:.|...|.....
  Rat   182 DSCGRVESS-CTMSEPIEAQCEDLSLKKYPAMPKGKTNSQCLETKERLVQNSGLIERDRTHTGER 245

  Fly    61 ADKRIIVTDKGYHCTVCNKDFRSRTQQYYHLTCGNDLLKKFNCKECGRRFATSSHLKYHLMSHEK 125
            :.:.::     |..:|..:          |.....:  |...|:|||:.|..||||..|...|..
  Rat   246 SCESVV-----YQSSVATE----------HQEISKE--KGHPCQECGKVFQRSSHLIRHQKIHLG 293

  Fly   126 QSKHSCSVCHKSFKQPIVLQRHMLTHNQEK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCEL 189
            :..:.|..|.|.|.|...|..|:..|..|| :||..|.|.|||.|.|..|..|||. ....:|:.
  Rat   294 EKPYQCKECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQKIHSQ-DEPRECKE 357

  Fly   190 CSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDP 254
            |.|.|.....|..|.|.|.::. ||.|..|.|:|...:.|..|.:.|:..:...|::|.|::...
  Rat   358 CGKTFSRALLLTHHQRVHGRSK-RHHCNECGKAFSLTSDLIRHHRIHTGEKPFKCNVCQKAFRLN 421

  Fly   255 DALGRHLRQHKTAERYRCIQCDITINRKDNMLRHLRSMH 293
            ..|.:|:|.|...:.|:|.:|:....:|..:.:|.|..|
  Rat   422 SHLDQHVRIHNEEKLYKCSECNEAFRQKSGLFQHQRHHH 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 2/19 (11%)
C2H2 Zn finger 103..123 CDD:275368 10/19 (53%)
COG5048 <112..288 CDD:227381 57/176 (32%)
C2H2 Zn finger 131..151 CDD:275368 7/19 (37%)
Chordopox_A33R 151..>254 CDD:283591 36/103 (35%)
C2H2 Zn finger 158..178 CDD:275368 9/19 (47%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..290 CDD:275368 4/17 (24%)
Zscan26XP_017456272.1 SCAN 43..148 CDD:413396
COG5048 <194..422 CDD:227381 65/246 (26%)
C2H2 Zn finger 247..263 CDD:275368 3/30 (10%)
C2H2 Zn finger 271..291 CDD:275368 10/19 (53%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..347 CDD:275368 9/19 (47%)
C2H2 Zn finger 355..375 CDD:275368 7/19 (37%)
C2H2 Zn finger 383..403 CDD:275368 6/19 (32%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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