DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and PRDM5

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001366033.1 Gene:PRDM5 / 11107 HGNCID:9349 Length:641 Species:Homo sapiens


Alignment Length:387 Identity:99/387 - (25%)
Similarity:160/387 - (41%) Gaps:78/387 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KCPRCNCD-------------ATGQNRLV--TDSCG----------------HTK-------CRL 29
            :|..||..             ..|..|.|  .||||                ||.       |.:
Human   235 QCSVCNSSFSSASSFEQHQETCRGDARFVCKADSCGKRLKSKDALKRHQENVHTGDPKKKLICSV 299

  Fly    30 C--------------LVADVSDCLECRVARSVDIQETQETQARTSADKRI-----IVTDKGYHCT 75
            |              .:.::.||.|| :.:.:...:.:.... |.:|.|:     ::..:.|:|.
Human   300 CNKKCSSASSLQEHRKIHEIFDCQEC-MKKFISANQLKRHMI-THSDMRLSPLIFLIEKRPYNCE 362

  Fly    76 VCNKDFRSRTQQYYHLTCGNDLLKKFNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQ 140
            :|||.|:...|...|....:: .|.:.||.||:.||..:..|.|..:|.::....|..|...|:.
Human   363 ICNKSFKRLDQVGAHKVIHSE-DKPYKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRT 426

  Fly   141 PIVLQRHMLTHNQEKHL-CPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHL 204
            |..||||:|.||.|:.. |..|...|:||.:|..|:.:..:...:::||||:|.|...:.|..|.
Human   427 PFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPSVLRSHK 491

  Fly   205 RKH--DKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTA 267
            :.|  :|..|   |..|.:.|....|||:|::.|:......|..|.|.::..|.|..|:|.|...
Human   492 KTHTGEKEKI---CPYCGQKFASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTRE 553

  Fly   268 ERYRCIQCDITINRKDNMLRHLRSMHPG--------CAFASTVEMVTPRSSAQEATTAEERP 321
            :.|:|.:|....::|..:..|.|: |.|        |..|.:::.:..|   .:.|....||
Human   554 KPYKCSECSKAFSQKRGLDEHKRT-HTGEKPFQCDVCDLAFSLKKMLIR---HKMTHNPNRP 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/19 (37%)
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 53/178 (30%)
C2H2 Zn finger 131..151 CDD:275368 9/19 (47%)
Chordopox_A33R 151..>254 CDD:283591 32/105 (30%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 187..207 CDD:275368 8/19 (42%)
C2H2 Zn finger 216..236 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..290 CDD:275368 4/17 (24%)
PRDM5NP_001366033.1 PR-SET_PRDM5 2..128 CDD:380967
COG5048 <145..338 CDD:227381 18/103 (17%)
C2H2 Zn finger 169..190 CDD:275368
C2H2 Zn finger 201..221 CDD:275368
C2H2 Zn finger 236..256 CDD:275368 3/19 (16%)
COG5048 262..631 CDD:227381 94/360 (26%)
C2H2 Zn finger 264..287 CDD:275368 4/22 (18%)
C2H2 Zn finger 297..317 CDD:275368 2/19 (11%)
C2H2 Zn finger 322..342 CDD:275368 3/21 (14%)
C2H2 Zn finger 361..381 CDD:275368 7/19 (37%)
C2H2 Zn finger 389..409 CDD:275368 8/19 (42%)
C2H2 Zn finger 417..437 CDD:275368 9/19 (47%)
C2H2 Zn finger 445..462 CDD:275368 6/16 (38%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
C2H2 Zn finger 502..522 CDD:275368 7/19 (37%)
C2H2 Zn finger 530..550 CDD:275368 7/19 (37%)
C2H2 Zn finger 558..578 CDD:275368 5/20 (25%)
C2H2 Zn finger 586..606 CDD:275368 3/22 (14%)
C2H2 Zn finger 615..636 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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