DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp174

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_006245901.1 Gene:Zfp174 / 102551846 RGDID:7498198 Length:406 Species:Rattus norvegicus


Alignment Length:102 Identity:35/102 - (34%)
Similarity:49/102 - (48%) Gaps:6/102 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 RRKSSL---ASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQT 227
            |..|||   ..|.|.||  ...::|:.|.|.|...:.|.:|.|.|.... .::|..|...|.||:
  Rat   305 RSLSSLLQRLGHQAAHS--AKPYRCDDCGKSFTWNSELKRHTRVHTGER-PYICGECGNCFGRQS 366

  Fly   228 TLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQH 264
            ||:||.:.|:..:...||.|||.:.....|.:|.|.|
  Rat   367 TLKLHQRIHTGEKPYQCSHCGKCFRQSSNLHQHHRLH 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 103..123 CDD:275368
COG5048 <112..288 CDD:227381 35/102 (34%)
C2H2 Zn finger 131..151 CDD:275368
Chordopox_A33R 151..>254 CDD:283591 31/90 (34%)
C2H2 Zn finger 158..178 CDD:275368 6/14 (43%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 9/19 (47%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
C2H2 Zn finger 272..290 CDD:275368
Zfp174XP_006245901.1 SCAN 42..152 CDD:128708
SCAN 42..130 CDD:280241
zf-C2H2 325..347 CDD:278523 7/21 (33%)
C2H2 Zn finger 327..347 CDD:275368 7/19 (37%)
zf-H2C2_2 339..364 CDD:290200 7/25 (28%)
COG5048 351..>406 CDD:227381 19/54 (35%)
C2H2 Zn finger 355..375 CDD:275368 9/19 (47%)
zf-H2C2_2 368..392 CDD:290200 9/23 (39%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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