DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42726 and Zfp113

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_008767294.1 Gene:Zfp113 / 100912096 RGDID:6489147 Length:446 Species:Rattus norvegicus


Alignment Length:334 Identity:82/334 - (24%)
Similarity:131/334 - (39%) Gaps:59/334 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TGQNRLVTDSCGHTKCRLCL---VADVSDCLECRVARSVD------------------IQETQET 55
            ||.::::::..|  .|.:.|   ..|||..|:...|...:                  |||..:.
  Rat    97 TGNDQVISEGMG--SCEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGSSSVGRLNRKIQEFHQV 159

  Fly    56 Q-------------------------ARTSADKRIIVTDKGYHCTVCNKDFRSRTQ---QYYHLT 92
            :                         ::.::.:|:.:.|:.:.|..|:|.| :||.   |:..:.
  Rat   160 RVEKKLTHMGERNEKYSEFGNNFTVNSKLTSHQRLPMGDRPHKCDECSKSF-NRTSDLIQHQRIH 223

  Fly    93 CGNDLLKKFNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEK-H 156
            .|.   |.:.|.|||:.|:.|:||..|...|..:..:.|..|.|:|.....|..|...|..|| :
  Rat   224 TGE---KPYECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPY 285

  Fly   157 LCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHMCKVCQK 221
            .|..|.|.|...|:|..|..||:. ...:.|..|.|.|...:.|..|.|.|.... .:.|..|.|
  Rat   286 ECNECGKTFSWSSTLTHHQRIHTG-EKPYACNECGKAFSRSSTLIHHQRIHTGEK-PYECNECGK 348

  Fly   222 SFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRCIQCDITINRKDNML 286
            :|.:.:.|..|.:.|:..:...|..||..:.....|.:|.|.|.....|.|.:|.........::
  Rat   349 AFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALV 413

  Fly   287 RHLRSMHPG 295
            ||.| :|.|
  Rat   414 RHQR-IHTG 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/22 (32%)
C2H2 Zn finger 103..123 CDD:275368 9/19 (47%)
COG5048 <112..288 CDD:227381 48/176 (27%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
Chordopox_A33R 151..>254 CDD:283591 30/103 (29%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..290 CDD:275368 4/17 (24%)
Zfp113XP_008767294.1 KRAB 52..>92 CDD:214630
KRAB 52..91 CDD:279668
COG5048 <183..354 CDD:227381 51/176 (29%)
zf-C2H2 201..223 CDD:278523 7/22 (32%)
C2H2 Zn finger 203..223 CDD:275368 7/20 (35%)
zf-H2C2_2 215..240 CDD:290200 8/27 (30%)
C2H2 Zn finger 231..251 CDD:275368 9/19 (47%)
zf-H2C2_2 243..268 CDD:290200 8/24 (33%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
zf-H2C2_2 275..295 CDD:290200 7/19 (37%)
C2H2 Zn finger 287..307 CDD:275368 7/19 (37%)
zf-H2C2_2 300..324 CDD:290200 8/24 (33%)
C2H2 Zn finger 315..335 CDD:275368 7/19 (37%)
zf-H2C2_2 331..352 CDD:290200 7/21 (33%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
zf-H2C2_2 355..380 CDD:290200 6/24 (25%)
COG5048 367..>424 CDD:227381 15/56 (27%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
zf-H2C2_2 384..408 CDD:290200 7/23 (30%)
C2H2 Zn finger 399..419 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.