DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and Zfp17

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_017445566.1 Gene:Zfp17 / 100360772 RGDID:1624201 Length:864 Species:Rattus norvegicus


Alignment Length:365 Identity:101/365 - (27%)
Similarity:147/365 - (40%) Gaps:42/365 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLVTDSCGHTKCRLCLVADVSDCLECRVARSVDIQETQETQARTSADKRIIVTDKGYHCTVCNKD 80
            :|..|...||.      .|...|..|        :|:..|:|.....::|...:|.|.||:|.|.
  Rat   320 QLKVDHLVHTG------GDPYKCSSC--------EESFCTEAALQQHEQIHTEEKPYVCTLCGKA 370

  Fly    81 FRSRTQQYYHLTCGNDLLKK----FNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQP 141
            |...:..|.|     :|:.|    |.|..||:.|...|.|..|..||..:..:.|:.|.||||.|
  Rat   371 FSDGSAFYEH-----ELIHKNHTPFICDICGKAFLRKSELTSHKQSHSGEKPYKCNDCGKSFKFP 430

  Fly   142 IVLQRHMLTHNQEK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLR 205
            ..|:.|...|..|| :.|..|.|.|.:.:.|..|..||:. ...:.|..|.|.|..|:.|::|.:
  Rat   431 SQLKVHRQIHTGEKPYECRECGKSFSKTAKLKVHQRIHTG-EKPYVCSQCGKAFNQKSILDRHEK 494

  Fly   206 KHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERY 270
            .|.... .:.|..|.|||...:.|::|...|:..:...|..||||:|.|..|..|.:.|...:.|
  Rat   495 LHPGEK-PYKCSDCGKSFNYPSQLKVHCHSHTGEKPYKCHECGKSFNFPCELKVHYQNHTGEKPY 558

  Fly   271 RCIQCDITINRKDNMLRHLR---------SMHPGCAFASTVEMVTPRSSAQEATTAEERPSQTVR 326
            :|.:|....::...:..|.|         ..|.|.|| ||.|.|    ...|.....|:|.....
  Rat   559 KCRECWKLFSKMSQLKAHYRVHTGERPYKCSHCGKAF-STKEQV----QEHERIHTGEKPFVCTE 618

  Fly   327 YNSVIQSVGNVEPVMLL--QSTPLPSQLPELQMEKGKAVP 364
            ......|..:.....|:  :..|..||..|..:::....|
  Rat   619 CGKAFSSRSSFRKHQLIHTKEKPFVSQKCETGLQESTLTP 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/19 (37%)
C2H2 Zn finger 103..123 CDD:275368 7/19 (37%)
COG5048 <112..288 CDD:227381 54/176 (31%)
C2H2 Zn finger 131..151 CDD:275368 9/19 (47%)
Chordopox_A33R 151..>254 CDD:283591 33/103 (32%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..236 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 9/19 (47%)
C2H2 Zn finger 272..290 CDD:275368 3/17 (18%)
Zfp17XP_017445566.1 KRAB 27..84 CDD:214630
C2H2 Zn finger 305..328 CDD:275368 2/7 (29%)
C2H2 Zn finger 336..356 CDD:275368 5/27 (19%)
C2H2 Zn finger 364..384 CDD:275368 8/24 (33%)
COG5048 388..790 CDD:227381 79/278 (28%)
C2H2 Zn finger 392..412 CDD:275368 7/19 (37%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
C2H2 Zn finger 448..468 CDD:275368 6/19 (32%)
C2H2 Zn finger 476..496 CDD:275368 7/19 (37%)
C2H2 Zn finger 504..524 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275368 9/19 (47%)
C2H2 Zn finger 560..580 CDD:275368 4/19 (21%)
C2H2 Zn finger 588..608 CDD:275368 9/24 (38%)
C2H2 Zn finger 616..636 CDD:275368 2/19 (11%)
C2H2 Zn finger 671..691 CDD:275368
C2H2 Zn finger 699..719 CDD:275368
C2H2 Zn finger 727..747 CDD:275368
C2H2 Zn finger 755..775 CDD:275368
C2H2 Zn finger 783..803 CDD:275368
zf-H2C2_2 796..820 CDD:404364
C2H2 Zn finger 811..831 CDD:275368
C2H2 Zn finger 839..859 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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