DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42726 and znf1124

DIOPT Version :9

Sequence 1:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001103332.1 Gene:znf1124 / 100126136 ZFINID:ZDB-GENE-071004-105 Length:305 Species:Danio rerio


Alignment Length:281 Identity:78/281 - (27%)
Similarity:128/281 - (45%) Gaps:26/281 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VSDCLECRV-----ARSVDI----QETQETQARTSADKRIIVTD--------KGYHCTVCNKDFR 82
            :||...||:     .:.:|:    :|.:|.:.....::..:.||        ..:.||.|.|.|.
Zfish     1 MSDPEPCRIKHEDTEQQIDLIEEYEEIKEEEHHVKIEENHLQTDDIFKRRDKNSFTCTQCGKSFE 65

  Fly    83 SRTQQYYHLT--CGNDLLKKFNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQ 145
            |::....|:.  .|.   |.|.|.|||..|:.:|:|..|:..|..:..:.|:.|.|||.|...:.
Zfish    66 SKSSLKIHMRSHTGE---KPFTCTECGMSFSHTSNLNQHMRIHTGEKPYMCTQCGKSFSQSSDVN 127

  Fly   146 RHMLTHNQEK-HLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDK 209
            :||..|..|| ..|..|.|.|...|:|..|:.||:. ...:.|..|.|.|...:::.:|:|.|..
Zfish   128 KHMRIHTGEKPFTCTQCGKSFSHASTLNQHMKIHTG-EKPYMCTQCGKGFNQSSDVIKHMRSHTG 191

  Fly   210 NNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGRHLRQHKTAERYRCIQ 274
            .. ...|..|.|||.:.:.|..||..|:.....:|:.||||::....:.:|:..|...:.:.|.|
Zfish   192 EK-PFTCTQCGKSFSQSSNLNKHMWSHTGERPYTCTQCGKSFSQSSDVTKHMWSHTGEKPFTCTQ 255

  Fly   275 CDITINRKDNMLRHLRSMHPG 295
            |..:.:...|:.:| ..:|.|
Zfish   256 CGKSFSHSSNLNKH-TMIHTG 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 7/21 (33%)
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
COG5048 <112..288 CDD:227381 51/176 (29%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
Chordopox_A33R 151..>254 CDD:283591 33/103 (32%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 8/19 (42%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..290 CDD:275368 5/17 (29%)
znf1124NP_001103332.1 C2H2 Zn finger 57..77 CDD:275368 7/19 (37%)
zf-H2C2_2 69..94 CDD:290200 9/27 (33%)
C2H2 Zn finger 85..105 CDD:275368 8/19 (42%)
zf-H2C2_2 97..122 CDD:290200 8/24 (33%)
C2H2 Zn finger 113..133 CDD:275368 8/19 (42%)
COG5048 <118..304 CDD:227381 48/161 (30%)
zf-H2C2_2 125..150 CDD:290200 9/24 (38%)
C2H2 Zn finger 141..161 CDD:275368 7/19 (37%)
zf-H2C2_2 154..178 CDD:290200 8/24 (33%)
C2H2 Zn finger 169..189 CDD:275368 6/19 (32%)
zf-H2C2_2 184..206 CDD:290200 8/22 (36%)
C2H2 Zn finger 197..217 CDD:275368 8/19 (42%)
zf-H2C2_2 209..234 CDD:290200 9/24 (38%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
zf-H2C2_2 237..262 CDD:290200 5/24 (21%)
C2H2 Zn finger 253..273 CDD:275368 5/20 (25%)
zf-H2C2_2 265..290 CDD:290200 4/12 (33%)
C2H2 Zn finger 281..301 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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