DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and ATGLR1.2

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_199651.1 Gene:ATGLR1.2 / 834895 AraportID:AT5G48400 Length:867 Species:Arabidopsis thaliana


Alignment Length:942 Identity:183/942 - (19%)
Similarity:329/942 - (34%) Gaps:280/942 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TDIAMVLKELDALRLDVKVDDTTLTL----TRSEDGLDMQRFCEILSTVGASAVIDLTYSHWEEG 96
            :.::|.|.:......|.|   |.|:|    :..|..|.:....::|.|.|..|:|         |
plant    58 SSVSMALSDFYDNHNDYK---TRLSLLVRDSHGEPLLALDSVVDLLQTEGVQAII---------G 110

  Fly    97 YN------LVRSLG----IGYVRLERIMRPFLDMFGD-----------------FMRQKRANNVA 134
            .|      |:..||    :..:.|...|...|..:..                 |:.....|:||
plant   111 GNSLLEAKLLAELGEKARVPVISLNSPMSLSLSKYTHLIQATHNSASEVKGITAFLHGFDWNSVA 175

  Fly   135 MVFMNARDAVEAMQQMLVGYPFRTLIMDA----SQTDPGQHFLERIRSLRPAPT--YIALFARAA 193
            :|..:..|..|:|..|:..:....:.:.:    |.|......::|:|.|:...|  ::...:...
plant   176 LVLEDHDDWRESMHFMVDHFHENNVHVQSKVAFSVTSSEDSLMDRLRELKDLGTTVFVVHLSEVI 240

  Fly   194 AMNGIFEKVQKADLFQRPLEW----------HFVFLD--TRDRV-----FK-YRRQAELCTRFTL 240
            |.. :|...:|..:......|          |..|:|  |::.:     || |...::....|||
plant   241 ATR-LFPCAEKLGMMGEGFAWILTSRSMSSFHDQFIDDLTKEAMEGVVGFKSYIPMSKELHNFTL 304

  Fly   241 NPRAICRSMPMPDLYCGSGFT---MQRAMLLNVLRSLINAAQVSPGYPLAIYQDCNATASSSEVS 302
            ..|   :::|:.:: .||..|   :......:|..||.:||:|:           .....:|.:.
plant   305 RWR---KTLPVEEV-TGSEITRLSISGVWAHDVAWSLASAAEVT-----------RMPTVTSTLL 354

  Fly   303 DPLEKDDYNWLDMVHWSNFLAYAPPLPHIQDQFQSPVPGLTFAVN-ISAGYYSSEHEAKTDLAAW 366
            :.:::..:..|.    .||  ....:..:.|:|:        .|| |.:|        :..:..|
plant   355 EAIKESRFKGLS----GNF--QLDDMKLLSDKFE--------IVNMIGSG--------ERRVGFW 397

  Fly   367 SSVGEM---RLLNET-------ISPARRFFRIGTAESIPWSYLRREEGTGE---LIRDRSGLP-- 416
            :|.|..   |.|:.|       |.|.      |:|:| |.....||.|..:   |:...:..|  
plant   398 NSNGSFSNRRQLSSTHDNLETIIWPG------GSAQS-PKGRSLRESGRKKLRVLVTSSNRFPRL 455

  Fly   417 -------------IWEGYCIDFIIRLSQKLNFEFEIVAPEVG----------HMGELNELGEWDG 458
                         |.||:||:.........|:|.|.:....|          |    ::..::|.
plant   456 MKVETDPITHEITIVEGFCIEVFQASIAPFNYEVEYIRWLNGTNYTKLAYALH----SQKDKYDA 516

  Fly   459 VVGDLVRGETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVWL 523
            .|||:.            :.|:|...:||..||.|. |:.|...|   ..|::.|...|...:|:
plant   517 AVGDIT------------ITSDRSMYVDFTLPYTEM-GLGIVAAK---ERSMWVFFQPLTPNLWI 565

  Fly   524 SIVAALVGTAIMIWFMDKYSPYSSRNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISG 588
            :..|..|.|.|::|.:::   ..::..:.::|.     .:....||..::.......:....:| 
plant   566 TSAAFFVLTGIIVWLIER---AENKEFQGSWPQ-----QIGVVIWFGFSTLVYAHREKLQHNLS- 621

  Fly   589 RMLVAAYWLFVVLMLAT-FTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTH---QYF 649
             ..|...|:|.||:|.| :||.|.:.:||:                :|.:...:|...|   ...
plant   622 -RFVVTVWVFAVLILVTSYTATLTSMMTVQ----------------QIRFNANEDYVGHLSGSLI 669

  Fly   650 VNMKFAEDTLYRMWKELALNASKDFKK--------FRIWDYP-----IKEQYGHILLAINSSQPV 701
            .|......:| |..:.|.||.|:|:.:        :.:.:.|     :.|..||.|:        
plant   670 ANAALTNSSL-RAMRLLGLNTSEDYAQALMNKSVSYIVSELPYLKILLGENPGHFLM-------- 725

  Fly   702 ADAKEGFANVDAHENADYAFIHDSAEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDELSY 766
                                      :|.:.|.|             .:....|:||.|...:|.
plant   726 --------------------------VKTQSTTN-------------GFGFMFQKGSELAPNVSR 751

  Fly   767 AILELQKDRFFEELKAKYWNQSNLPNCPLSEDQEGITLESLGGVFIAT--LFGLVLAMMTL---- 825
            .|.:|:......|::.: |....|| ....:....|||....|:|:.|  .|...||::.:    
plant   752 EIAKLRTSERLNEMERR-WFDKQLP-YTTDDTSNPITLYRFRGLFMITGVSFAFALAVLLILWLR 814

  Fly   826 -GMEVL------YYKKKQNALEITQVRPVNDS 850
             ..|:|      |:.::.....|...|.::.|
plant   815 ERWEILVNSVNIYFSQRLRHFRILFTRTIHPS 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 85/447 (19%)
Lig_chan 520..818 CDD:278489 59/316 (19%)
ATGLR1.2NP_199651.1 PBP1_GABAb_receptor 41..407 CDD:107361 75/398 (19%)
ANF_receptor 55..387 CDD:279440 70/370 (19%)
GluR_Plant 440..770 CDD:270404 78/424 (18%)
Lig_chan 563..801 CDD:278489 58/313 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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