DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and GLR2.1

DIOPT Version :10

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_198062.2 Gene:GLR2.1 / 832768 AraportID:AT5G27100 Length:901 Species:Arabidopsis thaliana


Alignment Length:937 Identity:172/937 - (18%)
Similarity:327/937 - (34%) Gaps:262/937 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VDDTTLTLTRSEDGLDMQRFCEILSTVG------ASAVIDL---------TYSHWEEGYNLVRSL 103
            ||.....:|.:...||:....|:.:.:|      |..:|::         |||        ..|.
plant    75 VDSKNDVVTAAAAALDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYS--------ATSP 131

  Fly   104 GIGYVRLERIMRPFLD-------------MFGDFMRQKRANNVAMVFMNARDA---------VEA 146
            .:..:|.:...|...|             :||       ...||.|:::  |.         .:.
plant   132 SLASIRSQYFFRATYDDSSQVHAIKEIIKLFG-------WREVAPVYVD--DTFGEGIMPRLTDV 187

  Fly   147 MQQMLVGYPFRTLIMDASQTDPGQHFLERIRSLRPAPTYIALFARAAAMNGIFEKVQKADLFQRP 211
            :|::.|..|:||:|...:..|.....|.|:.:| |...::.......| :..|.|..:..|.::.
plant   188 LQEINVRIPYRTVISPNATDDEISVELLRMMTL-PTRVFVVHLVELLA-SRFFAKATEIGLMKQG 250

  Fly   212 LEWHFVFLDTRDRVFKYRRQAELCTR------FTLNPRA---------ICRSMPMPDL--YCGSG 259
            ..|  :..:|...|.....:.|:.|.      .|..||:         ..:..|:.||  |....
plant   251 YVW--ILTNTITDVLSIMNETEIETMQGVLGVKTYVPRSKELENFRSRWTKRFPISDLNVYGLWA 313

  Fly   260 FTMQRAMLLNVLRSLINAAQVSPGYPLAIYQDCNATASSSEVSDPLEKDDY--NWLDMVHWSNFL 322
            :....|:.|.:..:         |.....:...:|..:.||:.. |....|  ..|..:....|.
plant   314 YDATTALALAIEEA---------GTSNLTFVKMDAKRNVSELQG-LGVSQYGPKLLQTLSRVRFQ 368

  Fly   323 AYAPPLPHIQDQFQSPVPGLTFAVNISA------GYYSSEH----------EAKTDLAAWSSVGE 371
            ..|.....|..:.|   |.:...||::.      |::..|:          .:||..::|..   
plant   369 GLAGDFQFINGELQ---PSVFEIVNVNGQGGRTIGFWMKEYGLFKNVDQKPASKTTFSSWQD--- 427

  Fly   372 MRLLNETISPARRFFRIGTAESIPWSYLRREEGTGELIRDRSGLP-------------------- 416
              .|...|.|       |...|:|..:.....|.    |.:.|:|                    
plant   428 --RLRPIIWP-------GDTTSVPKGWEIPTNGK----RLQIGVPVNNTFQQFVKATRDPITNST 479

  Fly   417 IWEGYCIDFIIRLSQKLNFE--FEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKMYS 479
            |:.|:.||:...:.|.:.::  ::.:.         .:.|.:|.:|..:..|:.|..:|...:.|
plant   480 IFSGFSIDYFEAVIQAIPYDISYDFIP---------FQDGGYDALVYQVYLGKYDAVVADTTISS 535

  Fly   480 EREEVIDFLPPYYEQ-TGISIAIRKPVRRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMD-KY 542
            .|...:||..||... .|:.:.::..|||:|.. |:..|.|.:||..:.:.....:::|.:: :.
plant   536 NRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTI-FLMPLTLALWLISLLSFFIIGLVVWVLEHRV 599

  Fly   543 SPYSSRNNRQAYPYACREFTLRESFW--FALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLAT 605
            :|......         ::.|...||  |::..|.|:   |...:...|::|..::..|:::..:
plant   600 NPDFDGPG---------QYQLSTIFWFSFSIMVFAPR---ERVLSFWARVVVIIWYFLVLVLTQS 652

  Fly   606 FTANLAAFLTVERMQTPVQSLEQ-LARQSRINYTV------VKDSDTHQYFVNMKFAEDTLYRMW 663
            :||:||:.||.:.:...|.::.. ||:...:.|..      ::||.         |:|.:|.   
plant   653 YTASLASLLTTQHLHPTVTNINSLLAKGESVGYQSSFILGRLRDSG---------FSEASLV--- 705

  Fly   664 KELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADA--KEGFANVDAHENADYAFIHDSA 726
                                   .||        |....||  .:|.|     |....|.:.:..
plant   706 -----------------------SYG--------SPEHCDALLSKGQA-----EGGVSAVLMEVP 734

  Fly   727 EIKYEITRNCNLTEVGEVFAEQPYAV-----AVQQGSHLGDELSYAILELQKDRFFEELKAKYWN 786
            .::..:.:.||..::    .:.|:.|     ....||.|..::|.|||::::.....:|: ..|.
plant   735 YVRIFLGQYCNKYKM----VQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLE-NAWF 794

  Fly   787 QSNLPNCP----LSEDQEGITLESLG--GVFIATLFGLVLAMMTLGMEVLYYKKKQNALE----- 840
            :....:||    ..:....::...||  ..::..|...::..|.| ::.:|...|:|..:     
plant   795 KPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMAL-LKFVYQFLKENPNQRNLRV 858

  Fly   841 -------------ITQVRPVNDSSGSG 854
                         |..|.....|||.|
plant   859 LWEKFNEPDQKSYIKDVTKCQCSSGQG 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 82/442 (19%)
GLR2.1NP_198062.2 PBP1_GABAb_receptor_plant 33..411 CDD:380645 67/369 (18%)
GluR_Plant 452..794 CDD:270404 78/420 (19%)
Lig_chan 574..833 CDD:459656 57/323 (18%)

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