DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and GLR2.7

DIOPT Version :10

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:490 Identity:103/490 - (21%)
Similarity:199/490 - (40%) Gaps:101/490 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 LLNETISPARRFFRIGTAESIP--WSYLRREEGTGELIRDRSGLPIWE----------------- 419
            :|.|.:.|.   ...|.::.:|  |..    ...|:::  |.|:|:.:                 
plant   432 VLGERLGPV---IWPGKSKDVPKGWQI----PTNGKML--RVGIPVKKGFLEFVDAKIDPISNAM 487

  Fly   420 ---GYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKMYSER 481
               ||||:....:.:||.:.   |.|:  ::..|:....:|.:|..:..|..|..:..:.:.:.|
plant   488 TPTGYCIEIFEAVLKKLPYS---VIPK--YIAFLSPDENYDEMVYQVYTGAYDAVVGDVTIVANR 547

  Fly   482 EEVIDFLPPYYEQTGISIAIRKPVR-RTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDKYSPY 545
            ...:||..||.| :|:|:.:  |:: ..:.:.|:....|::|::.....|....::|.::    :
plant   548 SLYVDFTLPYTE-SGVSMMV--PLKDNKNTWVFLRPWSLDLWVTTACFFVFIGFIVWILE----H 605

  Fly   546 SSRNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISG-RMLVAAYWLFVVLML-ATFTA 608
            ....:.:..|:    ..:..|||||   |:........|.:|. ...|...|.||||:| .::||
plant   606 RVNTDFRGPPH----HQIGTSFWFA---FSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTA 663

  Fly   609 NLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKFAEDTLYRMWKELALNASKD 673
            ||.:|.||:.:|..|.:.:.|.:.::                |:.:...|..|     .|..|:.
plant   664 NLTSFFTVKLLQPTVTNWKDLIKFNK----------------NIGYQRGTFVR-----ELLKSQG 707

  Fly   674 FKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHDSAEIKYEITRNCN- 737
            |.:.::      :.:|          ...:..|.|:|.....:.|     :.|.||..:::|.: 
plant   708 FDESQL------KPFG----------SAVECDELFSNGTITASFD-----EVAYIKVILSQNSSK 751

  Fly   738 LTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPNCP---LSEDQ 799
            .|.|...|....:.....:.|.|.|::|.|||.:.:....:.::.|::.:.|  |||   .|...
plant   752 YTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPN--NCPDLNTSLSS 814

  Fly   800 EGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKK 834
            ..::|.|..|:|:.......||::......||..|
plant   815 NHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHK 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 86/428 (20%)
GLR2.7NP_180476.3 PBP1_GABAb_receptor_plant 40..423 CDD:380645
GluR_Plant 460..799 CDD:270404 82/401 (20%)
Lig_chan 582..832 CDD:459656 65/304 (21%)
Blue background indicates that the domain is not in the aligned region.

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