DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and GLR2.3

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001325281.1 Gene:GLR2.3 / 817007 AraportID:AT2G24710 Length:919 Species:Arabidopsis thaliana


Alignment Length:516 Identity:115/516 - (22%)
Similarity:202/516 - (39%) Gaps:132/516 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 GTAESIP--WSY------LR----REEGTGELI---RDRSGLPIWE-----GYCIDF---IIR-L 429
            |.|:|:|  |..      ||    :..|..:|:   ||    ||..     |:||||   :|| |
plant   460 GEADSVPKGWQIPTKGKKLRIGVPKRTGYTDLVKVTRD----PITNSTVVTGFCIDFFEAVIREL 520

  Fly   430 SQKLNFEF-EIVAPEVGHMGELNE------LGEWDGVVGDLVRGETDFAIAALKMYSEREEVIDF 487
            ...:::|| ....|:....|..|:      ||.:|.||||..            :...|...:||
plant   521 PYDVSYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVGDTT------------ILVNRSSYVDF 573

  Fly   488 LPPYYEQ-TGISIAIRKPVRRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMD-KYSPYSSRNN 550
            ..|:.:. .|:.:.:..||:|..:. ||..|..::||:...:.......:|.:: |.:|..|...
plant   574 TFPFIKSGVGLIVEMTDPVKRDYIL-FMKPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFSGPP 637

  Fly   551 RQAYPYACREFTLRESFWFALTS--FTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAF 613
            |......|         |||.::  |.|:   |...:...|.||.|::..|:::..::||:||:.
plant   638 RFQASTIC---------WFAFSTMVFAPR---ERVFSFWARALVIAWYFLVLVLTQSYTASLASL 690

  Fly   614 LTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQY----FVNMKFAEDTLYRMWKELALNASKDF 674
            ||.:::...:.|:..|          ::..:|..|    |:..|..|               :.|
plant   691 LTSQKLNPTITSMSSL----------LEKGETVGYQRTSFILGKLKE---------------RGF 730

  Fly   675 KKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHDSAEIKY---EITRNC 736
            .:..:..:...|:...:|    |..|......|            ||:    ||.|   .:.:.|
plant   731 PQSSLVPFDTAEECDELL----SKGPKKGGVSG------------AFL----EIPYLRLFLGQFC 775

  Fly   737 NLTE-VGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPNCP------ 794
            |..: |.|.|....:......||.|..::|.|||::.:.....||: :.|.:....:||      
plant   776 NTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELE-RAWFKKKEQSCPDPITNP 839

  Fly   795 ---LSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYY--KKKQNALEITQVRPVNDS 850
               .|.....:.::|...:|:..   |::.:|.||.....:  |.:.:.|:..::.|.:.|
plant   840 DPNPSFTSRQLDIDSFLFLFVGV---LLVCVMALGNFTYCFLAKDQVSYLDKVEMSPCSSS 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 101/439 (23%)
Lig_chan 520..818 CDD:278489 63/317 (20%)
GLR2.3NP_001325281.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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