DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:426 Identity:133/426 - (31%)
Similarity:226/426 - (53%) Gaps:57/426 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 EGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKMYSEREE 483
            ||:|||.:..:|.||.|::::...:.|..|:.::.|.|:|::|::||||.|.|:|.|.:.::||.
Zfish    44 EGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAVAPLTLTAQREA 108

  Fly   484 VIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRL---EVWLSIVAALVGTAIMIWFMDKYSP- 544
            |:|...|:. |||:|..:||.:.... .:|:::|:|   |:|:.::.|.:.|:|.|:.:.:.|| 
Zfish   109 VVDMSKPFM-QTGLSFIMRKDLGSDD-SQFLSLLKLFSTEMWMGVLVAYLLTSICIFLVSRISPC 171

  Fly   545 ---YSSRNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATF 606
               ...::|        ..|||..|||:.:.:.|.||.|..|||:|||::.:.:|:|.:::||.:
Zfish   172 EWEQPEKDN--------NSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITSIWWIFSLVLLACY 228

  Fly   607 TANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKFAEDTLYRMWKELALNAS 671
            .|||:.:|..:..|..:::.|.||.|:.|.|..:|||.:..:|.|..  ..|.:|:::.      
Zfish   229 FANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNSN--NPTYHRIYEH------ 285

  Fly   672 KDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHDSAEIKYEITRNC 736
                        |||...:.|          :|.|||...   :..:||||.:|..:...:.|.|
Zfish   286 ------------IKEAQSYSL----------NAAEGFRRA---QKGNYAFIGESVSLDLAVARYC 325

  Fly   737 NLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPNCPLSEDQEG 801
            |||...|:...:.|::|...||.|...||.|||.|.:....:..::|:|..|    | :::|.:|
Zfish   326 NLTRAPEIIGMRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWASS----C-VAKDSKG 385

  Fly   802 ITLE--SLGGVFIATLFGLVLAMMTLGMEVLYYKKK 835
            ..|:  ||.|||:...|||.|.:....||:....:|
Zfish   386 APLKPASLKGVFLLLAFGLGLGIFLALMELAAKSRK 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 115/373 (31%)
Lig_chan 520..818 CDD:278489 90/303 (30%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 115/373 (31%)
Lig_chan 146..396 CDD:278489 86/295 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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