DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and Ekar

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:950 Identity:213/950 - (22%)
Similarity:388/950 - (40%) Gaps:238/950 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ITFWIEPVQRAE-FDTDIAMVLKELDALRLDVKVDDTTLTLTRSEDGLDMQRFCEILS--TVGAS 83
            :.:::|.|.|.: |:|    |.|....:|:.|:   ...:.|.|.....:...|:.|.  .:|.|
  Fly    61 VDYYVEYVNRFDSFET----VQKVCKLIRVGVQ---AVFSPTDSVLATHINSICDALDIPNIGRS 118

  Fly    84 A------------VID------LTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDMFGD-FMRQKR 129
            |            :::      :.|.:|.. :.::.....|.:.|.::.|.|   .|: .|||. 
  Fly   119 AHDFSINVYPSKQLVNYAFNDVIQYLNWTR-FGILHEKENGIINLHQLSRSF---HGEVHMRQV- 178

  Fly   130 ANNVAMVFMNARDAVEAMQQMLVGYPFRTLIMDASQTDPGQHFLERIRSLRPAPTYIALFARAAA 194
                      :||:..:......|.....:|:|.:.                             
  Fly   179 ----------SRDSYVSALNEFKGKEIHNIIIDTNS----------------------------- 204

  Fly   195 MNGIFEKVQKADLFQRPL---EWHFVF----LDTRD-RVFKYRRQAELCTRFTLNPRA-ICRSMP 250
             |||  .:...::.|:.:   ::|::|    |:|.| ..|||  .....|.|.|...| :.....
  Fly   205 -NGI--SILLKNILQQQMNEYKYHYLFTSFDLETYDLEDFKY--NFVNITSFRLVDTADVGVKQI 264

  Fly   251 MPDLYCGSGFTMQRAML-LNVLRSLI----NAAQVSPGYPLAI-YQDCNATASSSEVSDPLEKDD 309
            :.|:...|....::..| |::.:|.|    .|......|..|| .|....:.|.:.::...|:::
  Fly   265 LKDIGLYSHHIFKKPYLNLHIKKSTILESEPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEEN 329

  Fly   310 --------YNWLDMVHWSNFLAYAPPLPHIQDQFQSPVPGLTFAVNISAGYYSSEHEAKTDL--- 363
                    .|:|:.|.|.                     |||..:....|   ...:.|.||   
  Fly   330 SWDGGLSLINYLNAVEWK---------------------GLTGPIQFKDG---QRVQFKLDLIKL 370

  Fly   364 --------AAWSSVGEMRLLNETISPARRFFRIGTAE-------SIPWSYLRREEGTGELIRDRS 413
                    ..|:..|.:.:...::     ||..|:..       .:...|:....|     ::.:
  Fly   371 KQHSIVKVGEWTPHGHLNITEPSM-----FFDAGSMNVTLVVITILETPYVMMHYG-----KNFT 425

  Fly   414 GLPIWEGYCIDFIIRLSQKLNFEFEI-VAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKM 477
            |...:.|:|:|.:..:|:::.|::.: :.|:..:..:..|.|||:|:|..|::.:.|.|:.::.:
  Fly   426 GNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTI 490

  Fly   478 YSEREEVIDFLPPYYEQTGISIAIRKPVRR-TSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDK 541
            ...||.||||..|:. ..||||..:.|... |.||.||..|.:|:|:.::.|....::.|:.:.|
  Fly   491 TYARESVIDFTKPFM-NLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGK 554

  Fly   542 YSP--YSSRNNRQAYPYAC--------REFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYW 596
            .||  :...|       ||        .:|:|.:||||.:.:|..|.....|:|:|.|::.:.:.
  Fly   555 LSPIEWKCIN-------ACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWG 612

  Fly   597 LFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKFAEDTLYR 661
            .|.::::|::|||||||||.|||..|:::.|.||.|:.|:|..:....|      |.|..|::..
  Fly   613 FFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGST------MTFFRDSVIE 671

  Fly   662 MWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVA---DAKEGFANVDAHENADYAFIH 723
            .:|             :||            .::::.:|.|   ..::|...|:   ..:|||:.
  Fly   672 TYK-------------KIW------------RSMDNKKPSAFTTTYEDGIKRVN---QGNYAFLM 708

  Fly   724 DSAEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQS 788
            :|..:.|.:.|:||||::|.:...:.|.:|..:||...|::|.||||||:....:.|..|:|..:
  Fly   709 ESTMLDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNT 773

  Fly   789 N----LPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKKKQNALEITQVRPVND 849
            :    ..|.........:.|||:||||:..:.|:::|.:....| .:|..:.|.........||:
  Fly   774 DETCTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFE-FWYNFRYNYEATPSQSVVNN 837

  Fly   850 SSGSGGNSSTAPPTATSTTKQAWHIPVLEAEEKPAKVSPP 889
            .....|                    :||:|.   ..:||
  Fly   838 KYNQDG--------------------ILESER---NYTPP 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 118/424 (28%)
Lig_chan 520..818 CDD:278489 88/314 (28%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 73/406 (18%)
ANF_receptor 39..371 CDD:279440 71/389 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 115/415 (28%)
Lig_chan 533..807 CDD:278489 88/314 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.910

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