DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and Ir76b

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster


Alignment Length:633 Identity:141/633 - (22%)
Similarity:234/633 - (36%) Gaps:149/633 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 APPLPHIQ---DQFQSPVPGLTFAVNISAGYYSSEHEAKT------------DLAAWSSVGEMRL 374
            :||...||   :...|||..|...|:.|...:.::...:|            ::..|  :|...|
  Fly    23 SPPTNLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDW--IGGKHL 85

  Fly   375 LNETISPARRFFRIGTAESIPWSYLRREEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFEI 439
                        ||.|.|..|.||....|         :|..:..|.....|..|.:|.||.:|:
  Fly    86 ------------RIATLEDFPLSYTEVLE---------NGTRVGHGVSFQIIDFLKKKFNFTYEV 129

  Fly   440 VAPEVGHMGELNELGEWDGVVGDLVRGET-DFAIAALKMYSEREEVIDFLPPYYEQTGIS----- 498
            |.|:...:|..:   ::|..:.::|...| |.|.|.:...|::...:     ||..|.:.     
  Fly   130 VVPQDNIIGSPS---DFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFV-----YYSTTTLDEGEWI 186

  Fly   499 IAIRKPVRRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDKYSPYSSRN----NRQAYPYACR 559
            :.:::|....|....:......||:.|:.:|:....:|     |:....||    :.|..||   
  Fly   187 MVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPII-----YALIILRNRLTGDGQQTPY--- 243

  Fly   560 EFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQ 624
              :|....||...:...||...:|.|.|.|:|.|.:|:|:.::.:.:||||.||||:.:...|  
  Fly   244 --SLGHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLP-- 304

  Fly   625 SLEQLARQSRINYTVVKDSDT-HQYFVNMKFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQY 688
                        |..|.|..| :::||:|:..       ..|.|:..:.:  ...:.:..|:..|
  Fly   305 ------------YNTVNDILTKNKHFVSMRGG-------GVEYAIRTTNE--SLSMLNRMIQNNY 348

  Fly   689 GHILLAINSSQPVADAKEGFANVDAH-ENADYAFIHDSAEIKYEITR---------------NCN 737
                 |:.|     |......|:..: |...|.|:.|...|...:.|               :|.
  Fly   349 -----AVFS-----DETNDTYNLQNYVEKNGYVFVRDRPAINIMLYRDYLYRKTVSFSDEKVHCP 403

  Fly   738 LTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPN---CPLSEDQ 799
            .....|.|.::....|...||:|.......:|.|     .|....|:.::.|||:   ||  :|.
  Fly   404 FAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHL-----VESGIVKHLSKRNLPSAEICP--QDL 461

  Fly   800 EGITLESLGGVFIAT----LFGLVLAMMTLGMEVL--YYKKKQNALEITQVRPVNDSSGSG-GNS 857
            .|...:...|..:.|    |.|...|:.....|::  |...:|.|         |..:..| |.:
  Fly   462 GGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEA---------NKWARHGIGRT 517

  Fly   858 STAPPTATSTTKQAW------HIPVLEAEEKPAKVSPPPSFETATFRG 899
            ......|.|...:.|      |..:|.|......|:|||.:: :.|.|
  Fly   518 PNGQSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPPYQ-SIFNG 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 96/429 (22%)
Lig_chan 520..818 CDD:278489 75/325 (23%)
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 94/425 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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