DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and Ir75a

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:642 Identity:122/642 - (19%)
Similarity:228/642 - (35%) Gaps:161/642 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 LRSLINAAQVSPGY------PLAIYQD--CNATASSSEVS--DPLEKDDYNWLDMVHWSNF---- 321
            :|.::|.:.:...|      .||||.|  |:.|....|.:  :.:....|:||.:.:.|..    
  Fly    56 MRGVLNWSHLELSYMGHTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHYHWLLVGNQSKLEFYD 120

  Fly   322 ------LAYAPPLPHIQDQFQSPVPGLTFAVN-------ISAGY--YSSEHEAKTD--------- 362
                  ::....:.::::|.|.....:.:||:       |..|.  .:..||...|         
  Fly   121 LFGLFNISIDADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSCDPFVCRRTRH 185

  Fly   363 ---LAAWSSVGEMRLLNETISPARRFFRIGTAESIPWS------YLRREEGT--GELIRDRSGLP 416
               |...|..|....|.:.:   .|...:.|...:..|      :|.:|..|  ..|.|      
  Fly   186 LSSLQKRSKYGNREQLTDVV---LRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLAR------ 241

  Fly   417 IWEGYCIDFIIR--LSQKLNFEF-------EIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAI 472
              .|:.:..|:|  |..|:.|.|       ::|...||.:  :::..:..........|...:..
  Fly   242 --FGFHLTLILRDLLHCKMKFIFSDSWSKSDVVGGSVGAV--VDQTADLTATPSLATEGRLKYLS 302

  Fly   473 AALKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVWLSI--VAALVGTAIM 535
            |.::....|...| |..|:      :..:|..|       |:......||...  |.:|:|..:.
  Fly   303 AIIETGFFRSVCI-FRTPH------NAGLRGDV-------FLQPFSPLVWYLFGGVLSLIGVLLW 353

  Fly   536 IWFMDKYSPYSSRNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVV 600
            |.|..:......|......|      :|..:|..:..:...|.....|::..||::..|.:|...
  Fly   354 ITFYMECKRMQKRWRLDYLP------SLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLISF 412

  Fly   601 LMLATFTANLAAFLTVERMQTPVQSLEQLAR-------------QSRINYTVVKDSDTHQYFVNM 652
            :|...:|:.:.:.|....:::.::::.|||.             :|.:||:.:.:.   ..|:..
  Fly   413 IMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEI---HLFIKR 474

  Fly   653 KFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENA 717
            |....|   ...||.|.|.:..  .|:.|.|     |::.        |.:...|:|.|:.:..|
  Fly   475 KIESQT---QNPELWLPAEQGV--LRVRDNP-----GYVY--------VFETSSGYAYVERYFTA 521

  Fly   718 DYAFIHDSAEIKYEITRNCNLTEVGEVF-AEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELK 781
            .            ||   |:|.||  :| .||.:.      :||....:|.  ||.:.||...|:
  Fly   522 Q------------EI---CDLNEV--LFRPEQLFY------THLHRNSTYK--ELFRLRFLRILE 561

  Fly   782 A-------KYWNQSNLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLY 831
            .       .||....| :|........:.:|.:..:.:..:...:|.::.|.:|:.:
  Fly   562 TGVYRKQRSYWVHMKL-HCVAQNFVITVGMEYVAPLLLMLICADILVVVILLVELAW 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 87/442 (20%)
Lig_chan 520..818 CDD:278489 64/320 (20%)
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 64/318 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.