DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and Ir68a

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:607 Identity:117/607 - (19%)
Similarity:217/607 - (35%) Gaps:145/607 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 DMVH-WSNFLAYAPPLPHIQDQFQSPVPGLTFAV-NISAGYYSSEHEAKTDLAAWSSVGEMRLLN 376
            ||:| ||.|:    ....::.|..:.....|.|. .|.:|....::.|..:|....: |.:...:
  Fly   155 DMIHLWSVFI----DAIFLKRQLDNKYTISTIAFPGILSGVLVMKNIANWELGKGLN-GRILFAD 214

  Fly   377 ETISPARRFFRIGTAESIP---WSYLRREEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFE 438
            :|.:.......:..:|.:|   |:...:.               ::|..::.:..|.:.|||:..
  Fly   215 KTSNLFGTSLPVAISEHVPMVLWANATKS---------------FQGVEVEIMNALGKALNFKPV 264

  Fly   439 IVAPEVGHMGELNEL----------GEWDG-----------VVGDLVRGETDFAIAALKMYSERE 482
            ...|......:..||          |..||           :|.::......|||..|.::....
  Fly   265 YYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHLFQVYL 329

  Fly   483 EVIDFLPPY-YEQTGISIAIRKPVRRT--SLFKFMTVLRLEVWLSIVAAL--VGTAI-MIWFMDK 541
            ::::...|: :|    .:....|...|  |...|:......:|:.::.:|  |||.. .|.|::.
  Fly   330 KLVELSAPHNFE----CLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNA 390

  Fly   542 Y--SPYSS------RNNRQAYPYACREFTLRESFWFALTSFTPQGGGEAPKAISG---------- 588
            .  ...||      |.||.. |...:.:. |.||..|::.:....|...|:.:..          
  Fly   391 IINGNVSSEFFRCLRPNRNV-PMDPKIYR-RISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTY 453

  Fly   589 -----------------RMLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRIN 636
                             |:|...||::.:|::||:.|:..|.|.....:..:.:||.|.|.....
  Fly   454 SMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDLLRSHIPP 518

  Fly   637 YTVVKDSDTHQYFVNMKFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPV 701
            .|..  ::..|:|:.   |.|.:          |.|..:|..::.|               |..:
  Fly   519 STGA--TENRQFFLE---ANDEV----------ARKVGEKMEVFGY---------------SDDL 553

  Fly   702 AD--AKEGFANVDAHENADYAFIHDSAEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDEL 764
            ..  ||...|..|......|..:.|.:.....|.:.|.|        ..|..:|:::.|.|...:
  Fly   554 TSRIAKGQCAYYDNEFYLRYLRVADESGSALHIMKECVL--------YMPVVLAMEKNSALKPRV 610

  Fly   765 SYAILELQKDRFFEELKAKYWNQS--NLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGM 827
            ..:|..|.:.    .|.||:...:  :||...|::.:..:.::.....|:|.|.|.|::|:||..
  Fly   611 DASIQHLAEG----GLIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLA 671

  Fly   828 EVLYYKKKQNALEITQVRPVND 849
            |..::|      .|....|:.|
  Fly   672 ERWHFK------HIVMKHPMYD 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 86/469 (18%)
Lig_chan 520..818 CDD:278489 67/339 (20%)
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 50/273 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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