DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and GRIN2C

DIOPT Version :10

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_054171851.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1265 Species:Homo sapiens


Alignment Length:980 Identity:213/980 - (21%)
Similarity:341/980 - (34%) Gaps:293/980 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LRLDVKVDDTTLTLTRSEDGLDMQRFCEILS--------TVGASAVIDLTYSHWEEGYNLVRSLG 104
            |:|.|.::.....|.:..:..|...|..|.|        ..|..||.|.::..|.....:...||
Human   140 LQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADASHVSWRLLDVVTLELG 204

  Fly   105 IG--YVRLERIMRPFLD--MFGDFMRQKRANNVAMVFMNARDAVEAMQQMLVGYPFRTLIMDASQ 165
            .|  ..|.:|::|. ||  :|..:..::.|.   ::|      .||.|..|||            
Human   205 PGGPRARTQRLLRQ-LDAPVFVAYCSREEAE---VLF------AEAAQAGLVG------------ 247

  Fly   166 TDPGQHFLERIRSL----RPAPTYIALFARAAAMNGIFEKVQKADLFQRPLEWHFVFLDTRDRV- 225
              ||..:|....:|    .|..|:..         |:...|.::        |.   |..|.:| 
Human   248 --PGHVWLVPNLALGSTDAPPATFPV---------GLISVVTES--------WR---LSLRQKVR 290

  Fly   226 ----------FKYRRQAELCTRFTL-NPRAICRSMPMPDLYCGSGFTMQRAMLLNVLRSLINAA- 278
                      ..|.||     ..|| .|...||..|.|.......|          .|.|:|.. 
Human   291 DGVAILALGAHSYWRQ-----HGTLPAPAGDCRVHPGPVSPAREAF----------YRHLLNVTW 340

  Fly   279 -----QVSPG----YPLAIYQDCNATASSSEVSDPLEKDDYNWLDMV-HWSNFLAYA--PPLPHI 331
                 ..|||    .|..:....|.               :...:|| .|.:.:.|.  |..|..
Human   341 EGRDFSFSPGGYLVQPTMVVIALNR---------------HRLWEMVGRWEHGVLYMKYPVWPRY 390

  Fly   332 QDQFQSPVPG--LTFAVNISAGYYSSEH-EAKTDLAAWSSVGEMRLLNETISPARRFFRIGTAES 393
            ....|..|..  ||.|......:...|. :..|.....::|...|..|.|.|         :.:.
Human   391 SASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFS---------SGDV 446

  Fly   394 IPWSYLRREEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDG 458
            .|::.|                 ..:|:|||.:.:|::.:.|.:::.....|..|: ...|.|:|
Human   447 APYTKL-----------------CCKGFCIDILKKLARVVKFSYDLYLVTNGKHGK-RVRGVWNG 493

  Fly   459 VVGDLVRGETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVW- 522
            ::|::.....|.||.:|.:..||.|::||..|:.| ||||:.:.:.....|...|:......|| 
Human   494 MIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVE-TGISVMVARSNGTVSPSAFLEPYSPAVWV 557

  Fly   523 LSIVAALVGTAIMIWFMDKYSPYS-----SRNNRQAYPYACREFTLRESFW--FALTSFTPQGGG 580
            :..|..|...||.::..:.:||.|     :|..:...|    .||:.:|.|  :||. |......
Human   558 MMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGP----AFTIGKSVWLLWALV-FNNSVPI 617

  Fly   581 EAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQSLE------------------ 627
            |.|:..:.:::|..:..|.|:.||::|||||||:..|:....|..|.                  
Human   618 ENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKSLHLENTGVAWTAFK 682

  Fly   628 -------------------------QLARQSRINYTVVKDSDTHQYFVNMKFAEDTL--YRMWKE 665
                                     ...|..|.||   :|..||....|.:..||.|  .:|..|
Human   683 TFCSDYFQRPQDQYPPFRFGTVPNGSTERNIRSNY---RDMHTHMVKFNQRSVEDALTSLKMGSE 744

  Fly   666 LALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHDSAEIKY 730
                                            :|||....:             |||:|:|.:.|
Human   745 --------------------------------AQPVPRKLD-------------AFIYDAAVLNY 764

  Fly   731 EITRN--CNLTEV--GEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLP 791
            ...::  |.|..:  |:|||...|.:|:|:.||....:..|:|:...|...::|:. .|......
Human   765 MAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLET-VWLSGICQ 828

  Fly   792 NCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGME-VLYYKKKQNALEITQV-------RPVN 848
            |.........:.::::.|||...|..:.||::....| ::|:|.:.:....:|:       |.:.
Human   829 NEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPNSSQLDFLLAFSRGIY 893

  Fly   849 DSSGSGGNSSTAP-----PTATSTTKQAWHIPVLEAEE---KPAKVS------------------ 887
             |..||..|..:|     |..|:::.||..:.:|:|..   ..|.||                  
Human   894 -SCFSGVQSLASPPRQASPDLTASSAQASVLKMLQAARDMVTTAGVSSSLDRATRTIENWGGGRR 957

  Fly   888 -PPPS 891
             ||||
Human   958 APPPS 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 103/459 (22%)
GRIN2CXP_054171851.1 PBP1_iGluR_NMDA_NR2 28..384 CDD:380601 65/317 (21%)
PBP2_iGluR_NMDA_Nr2 400..829 CDD:270436 114/510 (22%)
NMDAR2_C 866..>941 CDD:463148 18/75 (24%)

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