DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and GRIN2A

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:959 Identity:198/959 - (20%)
Similarity:335/959 - (34%) Gaps:314/959 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TFWIEPVQRAEFDTDIAMVLKELDALRLDVKVDDTTLTLTRSEDGLDMQRFCEILSTVGA----- 82
            |.| .|.|.|              .|.|||.|  ..|.:.|::....:...|:::|  ||     
Human   105 TLW-GPEQAA--------------GLPLDVNV--VALLMNRTDPKSLITHVCDLMS--GARIHGL 150

  Fly    83 -----------SAVIDLTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDMFGDFMRQKRANNVAMV 136
                       :.::|...||     ..|..|||                         :..|.:
Human   151 VFGDDTDQEAVAQMLDFISSH-----TFVPILGI-------------------------HGGASM 185

  Fly   137 FMNARDAVEAMQQMLVGYPFRTLIMDASQTDPGQHFLERIRSLRPAPTYIALFARAAAMNGIFEK 201
            .|..:|......|.......:..:|.....|...|....:.::.|.......|.:....|..   
Human   186 IMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTTIFPGYREFISFVKTTVDNSF--- 247

  Fly   202 VQKADLFQRPLEWHFVFLDTRDRVFK-YRRQAELCTRFTLNPRAICRSMPMPDLYCGSGFTMQRA 265
                      :.|....:.|.|..|: .:.|.:|        :.|..|:.:  |||...   :..
Human   248 ----------VGWDMQNVITLDTSFEDAKTQVQL--------KKIHSSVIL--LYCSKD---EAV 289

  Fly   266 MLLNVLRSL----------------INAAQVSPGYPLAI----YQDCN--------------ATA 296
            ::|:..|||                .|...:...:|..:    |.|.:              .||
Human   290 LILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISVSYDDWDYSLEARVRDGIGILTTA 354

  Fly   297 SSSEVSDPLEKDDYNWLDMVHWSNFLAYAPPLPHIQ----DQFQSP-VPGLT---FAVNIS---- 349
            :||    .|||..|                 :|..:    .|.:.| ||..|   |.||::    
Human   355 ASS----MLEKFSY-----------------IPEAKASCYGQMERPEVPMHTLHPFMVNVTWDGK 398

  Fly   350 ------AGY----------YSSEHEAKTDLAAWSSVGEMRLLNETIS----------------PA 382
                  .||          .:.:.|       |..||:..  |.|:|                |.
Human   399 DLSFTEEGYQVHPRLVVIVLNKDRE-------WEKVGKWE--NHTLSLRHAVWPRYKSFSDCEPD 454

  Fly   383 RRFFRIGTAESIPW---------------------SYLRREEGTGELIRDRSGLPI---WEGYCI 423
            .....|.|.|..|:                     .:::....|.|      |:.:   .:|:||
Human   455 DNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNE------GMNVKKCCKGFCI 513

  Fly   424 DFIIRLSQKLNFEFEIVAPEVG-HMGELNELGEWDGVVGDLVRGETDFAIAALKMYSEREEVIDF 487
            |.:.:||:.:.|.:::.....| |..::|.:  |:|::|::|......|:.:|.:..||.||:||
Human   514 DILKKLSRTVKFTYDLYLVTNGKHGKKVNNV--WNGMIGEVVYQRAVMAVGSLTINEERSEVVDF 576

  Fly   488 LPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVW-LSIVAALVGTAIMIWFMDKYSPYSSRNN- 550
            ..|:.| ||||:.:.:.....|...|:......|| :..|..|:.:||.::..:.:||.....| 
Human   577 SVPFVE-TGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 640

  Fly   551 -RQAYPYACREFTLRESFW----FALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANL 610
             :...|:. ..||:.::.|    ....:..|.   :.||..:.:::|:.:..|.|:.||::||||
Human   641 AKGKAPHG-PSFTIGKAIWLLWGLVFNNSVPV---QNPKGTTSKIMVSVWAFFAVIFLASYTANL 701

  Fly   611 AAFLTVERMQTPVQSLEQLARQSRINYT------VVKDSDTHQYFVNMKFAEDTLYRMWKELALN 669
            |||:..|.....|..|.....|...:|:      .|.:..|.:...|                  
Human   702 AAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRN------------------ 748

  Fly   670 ASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADA----KEGFANVDAHENADYAFIHDSAEIKY 730
                       :||...||    :...:.:.|.||    |.|  .:|       |||:|:|.:.|
Human   749 -----------NYPYMHQY----MTKFNQKGVEDALVSLKTG--KLD-------AFIYDAAVLNY 789

  Fly   731 EITRN--CNLTEVGE--VFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYW------ 785
            :..|:  |.|..:|.  :||...|.:|:|:||....::..|:|:...|...|||:. .|      
Human   790 KAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELET-LWLTGICH 853

  Fly   786 NQSNLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKK 834
            |:.|    .:...|  :.::::.|||......:.|:::|...|.|:|.|
Human   854 NEKN----EVMSSQ--LDIDNMAGVFYMLAAAMALSLITFIWEHLFYWK 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 107/454 (24%)
Lig_chan 520..818 CDD:278489 76/324 (23%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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