DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and GRIK2

DIOPT Version :10

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:NP_068775.1 Gene:GRIK2 / 2898 HGNCID:4580 Length:908 Species:Homo sapiens


Alignment Length:99 Identity:22/99 - (22%)
Similarity:36/99 - (36%) Gaps:30/99 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAI- 176
            |...|....||:|:.:..|:......|          .|:        ..|:|....::..|:| 
Human   733 QSKVKGQSPAVVEVAESLKQETASAHG----------APE--------ESAEAVGHSFSLETSIL 779

  Fly   177 -DLIQHGVRVNSVSPGAVATGFMGAMGLPETASD 209
             ||       .::||...|   .|.:|||..|::
Human   780 PDL-------RTLSPSEEA---QGLLGLPSMAAE 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435
GRIK2NP_068775.1 PBP1_iGluR_Kainate 37..414 CDD:380605
Periplasmic_Binding_Protein_Type_2 430..800 CDD:473866 21/94 (22%)
Blue background indicates that the domain is not in the aligned region.

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