Sequence 1: | NP_727328.1 | Gene: | Ir8a / 31867 | FlyBaseID: | FBgn0052704 | Length: | 936 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038951440.1 | Gene: | Grin2d / 24412 | RGDID: | 2740 | Length: | 1334 | Species: | Rattus norvegicus |
Alignment Length: | 608 | Identity: | 145/608 - (23%) |
---|---|---|---|
Similarity: | 243/608 - (39%) | Gaps: | 120/608 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 366 WSSVGE-MRLLNETISPARRFFRIGTAESIPWSYLRREEG-TGELIRD----RSGL--------- 415
Fly 416 ------PIWEGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAA 474
Fly 475 LKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRL-----------EVW-LSIVA 527
Fly 528 ALVGTAIMIWFMDKYSPYS-SRNNRQAYPYACREFTLRESFW--FALTSFTPQGGGEAPKAISGR 589
Fly 590 MLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKF 654
Fly 655 AEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADY 719
Fly 720 AFIHDSAEIKYEITRN--CNLTEV--GEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEEL 780
Fly 781 KAKYWNQSNLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKKKQNALEITQ-- 843
Fly 844 --VRPVNDSSGSGGNSSTAPPTATSTTKQAWHIPVLEAEEKPAKVSPPPSFETATFRGKKLP--- 903
Fly 904 ---ARITLGDGKFKPRHGLYARR 923 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir8a | NP_727328.1 | PBP2_iGluR_putative | 383..786 | CDD:270435 | 109/441 (25%) |
Lig_chan | 520..818 | CDD:278489 | 74/305 (24%) | ||
Grin2d | XP_038951440.1 | PBP1_iGluR_NMDA_NR2 | 46..410 | CDD:380601 | |
PBP2_iGluR_NMDA_Nr2 | 427..838 | CDD:270436 | 110/446 (25%) | ||
PHA03307 | <1125..>1312 | CDD:223039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |