Sequence 1: | NP_727328.1 | Gene: | Ir8a / 31867 | FlyBaseID: | FBgn0052704 | Length: | 936 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036705.3 | Gene: | Grin2a / 24409 | RGDID: | 2737 | Length: | 1464 | Species: | Rattus norvegicus |
Alignment Length: | 953 | Identity: | 198/953 - (20%) |
---|---|---|---|
Similarity: | 345/953 - (36%) | Gaps: | 269/953 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 WIEPVQRAEFD-----TDIAMVL-----------------KELDALRLDVKVDDTTLTLTRSEDG 67
Fly 68 LDMQRFCEILSTVGASAVIDLTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDMFGD--FMRQKRA 130
Fly 131 NNVAMVFMNARDAVEAMQQMLVGYPFRTLIMDASQTDPGQHFLERIRSLRPAPTYIALFARAAAM 195
Fly 196 NGIFEKVQKADLFQRPLEWHFVFLDTRDRVFK-YRRQAELCTRFTLNPRAICRSMPMPDLYCGSG 259
Fly 260 FTMQRAMLLNVLRSL----------------INAAQVSPGYPLAI----YQDCN----------- 293
Fly 294 ---ATASSSEVSDPLEKDDYNWLDMVHWSNF-LAYAPPLP-HIQDQFQSPV----PGLTFAVNIS 349
Fly 350 AGY----------YSSEHEAKTDLAAWSSVGEMRLLNETIS----------------PARRFFRI 388
Fly 389 GTAESIPW---------------------SYLRREEGTGELIRDRSGLPI---WEGYCIDFIIRL 429
Fly 430 SQKLNFEFEIVAPEVG-HMGELNELGEWDGVVGDLVRGETDFAIAALKMYSEREEVIDFLPPYYE 493
Fly 494 QTGISIAIRKPVRRTSLFKFMTVLRLEVW-LSIVAALVGTAIMIWFMDKYSPYSSRNN--RQAYP 555
Fly 556 YACREFTLRESFW----FALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTV 616
Fly 617 ERMQTPVQSLEQLARQSRINYT------VVKDSDTHQYFVNMKFAEDTLYRMWKELALNASKDFK 675
Fly 676 KFRIWDYPIKEQYGHILLAINSSQPVADA----KEGFANVDAHENADYAFIHDSAEIKYEITRN- 735
Fly 736 -CNLTEVGE--VFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYW------NQSNLP 791
Fly 792 NCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKK 834 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir8a | NP_727328.1 | PBP2_iGluR_putative | 383..786 | CDD:270435 | 107/454 (24%) |
Lig_chan | 520..818 | CDD:278489 | 76/324 (23%) | ||
Grin2a | NP_036705.3 | PBP1_iGluR_NMDA_NR2 | 32..392 | CDD:107373 | 74/423 (17%) |
PBP2_iGluR_NMDA_Nr2 | 403..802 | CDD:270436 | 107/454 (24%) | ||
HisJ | <458..>541 | CDD:223904 | 28/85 (33%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY | 511..513 | 0/1 (0%) | |||
Lig_chan | 556..828 | CDD:278489 | 76/324 (23%) | ||
Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 | 599..620 | 4/23 (17%) |