DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir8a and LOC100331381

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_017207884.1 Gene:LOC100331381 / 100331381 -ID:- Length:1063 Species:Danio rerio


Alignment Length:1007 Identity:228/1007 - (22%)
Similarity:382/1007 - (37%) Gaps:320/1007 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LPLLVLLLALRFAGSEVLKITFWIEPVQRAEFDTDIAMVLKELDALRLDVKVDDTT--------- 58
            ||.|:|.:.|.|.   ||.:|  :.|...::        :..|.|:|:...:||.:         
Zfish     4 LPALLLSIHLLFL---VLLLT--MAPSSHSQ--------VPALSAVRMAAILDDQSACGRGERLA 55

  Fly    59 LTLTRSE---------------DGLDMQR---------FCEIL-----STVG--ASAVIDLTYSH 92
            |.|.|..               |..::||         .|:||     |.:|  :|.....|.||
Zfish    56 LALARENINSLMEGPARARVEVDIFELQRDSQYETTDTMCQILPKGVVSVIGPASSPASGSTVSH 120

  Fly    93 ------------------------------WEEGYNLVRSLG-----IGY-------------VR 109
                                          :....:|..::|     .||             :|
Zfish   121 ICGEKEIPHIKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFGYPTASLICAKAECLLR 185

  Fly   110 LERIMRPFL--------DMFGD------FMRQKRANNVAMVFMNARDAVEAM------------- 147
            ||.::|.||        .|..:      .:::.|.:.||.:.::|..:|..:             
Zfish   186 LEELVRHFLISRETLSVRMLDENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSA 250

  Fly   148 --QQMLVGYPFRTLIMDASQTDPGQ------------HFLERIRSLRPAPTYIALFARAAAMNGI 198
              :.:|....|..|.:|....|...            .:||.||||.                  
Zfish   251 FYKYILTTMDFPLLRLDDVVNDQSNIVGFSMLNNSHPFYLEFIRSLN------------------ 297

  Fly   199 FEKVQKADLFQRPLEWHFVFLDTRDRVFKYRRQAELCTRFTLNPRAICRSMPMPDLYCGSGFTMQ 263
                         |.|                            |..|...|.|      |..:.
Zfish   298 -------------LSW----------------------------REGCDLSPYP------GPALS 315

  Fly   264 RAMLLNVLRSLI------NAAQVSPGYPLAIYQDCNATASSSEVSDPLEKDDYNWLDMVHWSNFL 322
            .|::.:.:..::      |.:|.....||:    |.::......:..:     |:|.||.:....
Zfish   316 SALMFDAVHVVVGAVRELNRSQEIGVKPLS----CTSSLIWQHGTSLM-----NYLRMVEYDGLT 371

  Fly   323 AYAPPLPHIQDQFQSPVPGLTFAVNISAGYYSSEHEAKTDLAAWSSVGEMRLLNETISPARRFFR 387
            .        :.:|.|......:.:.|...:.....|    :..|.|       |.|::.......
Zfish   372 G--------RVEFNSKGQRTNYTLRILEKFKGGHKE----IGVWYS-------NNTLAMNSTSLD 417

  Fly   388 IGTAESI-------------PWSYLRREEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFEI 439
            |.|:|::             |  |:.|:|.    .:|..|...:||:|:|.:..|:..|.|.|.|
Zfish   418 INTSETLANKTLTVTTILENP--YVMRKEN----YQDFQGSDQYEGFCVDMLRELADILKFSFRI 476

  Fly   440 VAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRKP 504
            ...:.|..|.....|.|.|:||:|:..:.|.|:|...:.||||:||||..|:. ..||||..|..
Zfish   477 KLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFM-NLGISILYRVH 540

  Fly   505 V-RRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDKYSPYSSRNNRQAYPYAC---------R 559
            : |:...|.|:......|||.::.|.:..:.:::...:.|||...|     |:.|         .
Zfish   541 IGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYN-----PFPCWRERRDLLEN 600

  Fly   560 EFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQ 624
            ::||..|.||.:..|..||....|:|:|.|.:...:|.|.:::::::||||||||||:||:.|::
Zfish   601 QYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIE 665

  Fly   625 SLEQLARQSRINYTVVKDSDTHQYFVNMKFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYG 689
            |.|.||.|:.|.|..::...|..:|:|.::  .|..|||..:                       
Zfish   666 SAEDLADQTNIQYGTIQGGSTMTFFMNSRY--QTYQRMWNYM----------------------- 705

  Fly   690 HILLAINSSQP---VADAKEGFANVDAHENADYAFIHDSAEIKYEITRNCNLTEVGEVFAEQPYA 751
                  .|.||   |...:||.|.|   .|:.|||:.:|...:|....|||||::|.:...:.|.
Zfish   706 ------YSKQPSVFVKSTEEGIARV---LNSKYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYG 761

  Fly   752 VAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLPNCPLSEDQ--EGITLESLGGVFIAT 814
            :.:..||...||::..||:||::...|.||.::|...   .|...||.  :|:.::::||:|:..
Zfish   762 IGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEGG---KCLKEEDHRAKGLGMDNIGGIFVVL 823

  Fly   815 LFGLVLAMMTLGMEVLYYKKKQNALEITQVRP 846
            :.||::|:....||.::..::  :.|..:|||
Zfish   824 ICGLIIAVFVAIMEFVWSTRR--SAETDEVRP 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 129/428 (30%)
Lig_chan 520..818 CDD:278489 91/311 (29%)
LOC100331381XP_017207884.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.