DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir8a and LOC100149482

DIOPT Version :9

Sequence 1:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:613 Identity:141/613 - (23%)
Similarity:246/613 - (40%) Gaps:149/613 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 AWSSVGEMRLLNETISPA--RRFFRIGTAESIPWSYLR-REEGTGELIRD-------------RS 413
            |||..|..      :.|.  .:..|:.|.|..|:..:. .:..:|..|||             :.
Zfish   418 AWSRYGPF------LQPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASALQE 476

  Fly   414 GL-PI---WEGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAA 474
            |: |:   .:|:|||.:.||::.:.|.:::.....|..|:..: |.|:|:||::|....|.||.:
Zfish   477 GVAPVKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKID-GVWNGMVGEVVYKRADMAIGS 540

  Fly   475 LKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVW-LSIVAALVGTAIMIWF 538
            |.:..||.||:||..|:.| ||||:.:.:.....|...|:......|| :..|..|...|:.::.
Zfish   541 LTINEERSEVVDFSVPFVE-TGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 604

  Fly   539 MDKYSPYSSRNNRQAYPYA-CREFTLRESFW--FALTSFTPQGGGEAPKAISGRMLVAAYWLFVV 600
            .:.:||.....:.|:...| ..:||:.:|.|  :||. |......|.||..:.:::|..:..|.|
Zfish   605 FEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWALV-FNNSVPVENPKGTTSKIMVLVWAFFAV 668

  Fly   601 LMLATFTANLAAFLTVE------------RMQTPVQSLEQL----------ARQSRINYTVVKDS 643
            :.||::|||||||:..|            :.|.|.:....|          .:..|.||     .
Zfish   669 IFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNIRSNY-----P 728

  Fly   644 DTHQYFV--NMKFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKE 706
            |.|||.|  |.|..||.:                             .|:             |.
Zfish   729 DMHQYMVKYNQKSVEDAI-----------------------------SHL-------------KT 751

  Fly   707 GFANVDAHENADYAFIHDSAEIKYEITRN--CNLTEV--GEVFAEQPYAVAVQQGSHLGDELSYA 767
            |  .:|       |||:|:|.:.|...::  |.:..:  |:|||...|.:|:.:.|.....|..|
Zfish   752 G--KLD-------AFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLA 807

  Fly   768 ILELQKDRFFEELKAKYWNQSNLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYY 832
            :|:|..|...|.|: :.|......|..:......:.::::.|||...|..:.|:::....|.|.|
Zfish   808 LLQLVGDDEIEMLE-RLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVY 871

  Fly   833 KKKQNALE-----------------ITQVRPVNDSSGSGG---------NSSTAPPTATSTTKQA 871
            .:.::.:.                 :.......|.:..||         :::..|.:::.....|
Zfish   872 WRLRHCMSKMGQSGKLDFLLAFSRGMYSCCSFEDETAQGGAKVTVSGHHHTAMVPTSSSHVVTSA 936

  Fly   872 WHIPVL-----EAEEKPAKVSPPPSFET 894
            ...|.:     :.:::|.:..||.|::|
Zfish   937 VSNPAIAMVQQQQQQQPQQPQPPQSYKT 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 115/452 (25%)
Lig_chan 520..818 CDD:278489 78/329 (24%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 2/2 (100%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 116/457 (25%)
HisJ <487..>570 CDD:223904 31/84 (37%)
Lig_chan 585..857 CDD:278489 78/329 (24%)
NMDAR2_C 868..>900 CDD:287527 2/31 (6%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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