DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31296 and pi15b

DIOPT Version :9

Sequence 1:NP_001262608.1 Gene:CG31296 / 318668 FlyBaseID:FBgn0051296 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_684600.2 Gene:pi15b / 556658 ZFINID:ZDB-GENE-070912-590 Length:257 Species:Danio rerio


Alignment Length:200 Identity:42/200 - (21%)
Similarity:72/200 - (36%) Gaps:64/200 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SRLSYSMELEDLARLAVITCSTHKFCLNSQEFYYVGTNIGSTHYLG-NLN----DYEDLELMLRI 150
            :.:.|.:..:.|||.|....:|   |:......|:      ..||| ||:    :|..:   |::
Zfish    85 ANMEYMLWDDGLARSAEAWAAT---CIWEHGPPYL------LRYLGQNLSVRTGNYRSI---LQL 137

  Fly   151 IQHW-TRYADYV---------NIKMGVYMPTTLGKSGIAKALLLMADRNTHVGCSAMRFTVHSVH 205
            ::.| ....||:         :..|..|.|.....:.:..|      .:..|||:     :.:..
Zfish   138 VKPWYDEVRDYMFPYPRDCNPHCPMRCYGPMCTHYTQMVWA------SSNRVGCA-----IQTCF 191

  Fly   206 NFV-----------FLCAFST--DLFVERPIYRMSMRPGAACKRLDPTYSALCAVGENYENNK-- 255
            |.|           .:|.:|.  :...|.| ||:    |..|....|:|...|:      ||.  
Zfish   192 NMVVWGAVWREATYLVCNYSPKGNWIGEAP-YRV----GVPCSACPPSYGGSCS------NNMCF 245

  Fly   256 PMLNA 260
            |.:|:
Zfish   246 PAINS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31296NP_001262608.1 SCP_euk 61..214 CDD:240180 28/148 (19%)
pi15bXP_684600.2 SCP_euk 68..211 CDD:240180 28/148 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.